Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 7
  • golgi 5
  • extracellular 5
  • vacuole 4
  • plasma membrane 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G58910.1 Thale cress cytosol, nucleus, peroxisome 14.02 35.05
AT3G59230.1 Thale cress cytosol 31.78 34.62
AT4G14096.2 Thale cress cytosol 29.53 33.76
AT3G59210.1 Thale cress cytosol, nucleus, peroxisome 30.28 33.47
AT3G59250.1 Thale cress cytosol 26.54 33.41
AT3G59170.1 Thale cress cytosol 29.53 33.4
AT4G14103.2 Thale cress cytosol 27.48 33.18
AT5G38386.2 Thale cress cytosol 24.86 33.0
AT3G59160.1 Thale cress cytosol 28.41 32.76
AT5G38390.1 Thale cress vacuole 27.48 32.24
CDX71909 Canola cytosol 30.65 32.09
AT5G38396.1 Thale cress cytosol 27.48 31.82
AT3G59200.1 Thale cress cytosol 30.84 31.73
AT1G58310.1 Thale cress cytosol 29.91 31.68
AT3G58900.4 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 27.48 31.61
AT5G38392.1 Thale cress cytosol 12.52 30.88
AT3G58860.1 Thale cress cytosol 26.36 30.85
AT4G13960.2 Thale cress cytosol 26.73 30.82
AT3G58880.1 Thale cress cytosol 25.98 30.62
AT3G58930.1 Thale cress cytosol 27.48 30.5
AT3G59190.2 Thale cress cytosol, nucleus, plastid 29.53 30.44
AT3G58890.1 Thale cress extracellular 16.64 30.38
AT2G42720.1 Thale cress cytosol, nucleus, peroxisome 25.05 30.25
AT3G59000.1 Thale cress cytosol 27.66 30.14
AT3G58950.1 Thale cress cytosol 23.36 29.98
AT3G49150.1 Thale cress cytosol 25.79 29.55
AT1G52650.1 Thale cress cytosol 25.61 29.46
AT3G59240.1 Thale cress cytosol 27.66 29.37
AT3G03030.1 Thale cress cytosol 25.98 29.32
AT2G42730.1 Thale cress cytosol 25.05 29.32
AT3G58820.1 Thale cress cytosol 22.62 29.3
AT5G38391.1 Thale cress cytosol 9.53 28.65
AT3G03040.1 Thale cress cytosol 25.23 28.6
AT5G41630.1 Thale cress cytosol 24.11 28.35
AT3G59180.1 Thale cress plasma membrane 24.86 28.0
AT3G59270.1 Thale cress cytosol 17.38 27.76
AT3G59150.1 Thale cress cytosol 24.11 27.16
AT5G41840.1 Thale cress cytosol 27.29 27.04
AT4G00320.1 Thale cress cytosol 25.61 27.02
AT5G41830.2 Thale cress cytosol 25.42 26.46
AT5G35926.2 Thale cress nucleus 20.0 24.71
AT3G58940.1 Thale cress cytosol 26.54 22.98
GSMUA_Achr2P13780_001 Banana cytosol 15.51 20.19
CDY06019 Canola cytosol 31.59 19.52
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1EntrezGene:842116ProteinID:AAG09102.1ProteinID:AEE33414.1ProteinID:AEE33415.1
EMBL:AK117458ArrayExpress:AT1G56610EnsemblPlantsGene:AT1G56610RefSeq:AT1G56610TAIR:AT1G56610RefSeq:AT1G56610-TAIR-G
EnsemblPlants:AT1G56610.1TAIR:AT1G56610.1Unigene:At.20575InterPro:FBDGO:GO:0005575GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016567
GO:GO:0019538InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_2RefSeq:NP_001031201.1RefSeq:NP_176054.2
PFAM:PF07723PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007095
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR31639PANTHER:PTHR31639:SF6
UniProt:Q8GYP8SMART:SM00579SUPFAM:SSF52047TMHMM:TMhelixUniParc:UPI00000ADDA0SEG:seg
Description
F-box protein At1g56610 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYP8]
Coordinates
chr1:+:21211974..21214562
Molecular Weight (calculated)
61765.2 Da
IEP (calculated)
5.501
GRAVY (calculated)
0.099
Length
535 amino acids
Sequence
(BLAST)
001: MGFALVLIFL FGFYLFLMKS SSIFPQRPFT FLYDLWVLLL VLRFLFSLIQ ILILCLFNFR FVEMTSNNKK KKTELCDLPK CLAPHILSWL PTKTAVTVSL
101: LFMKGWWRSE MKNLSSLKFS FSDDQEEEHF VRFVDQVLRQ RGNRKLDSFS LTLNDEIDGG FVTHLVDYPL DNGVEKLKLS IYDIKGNFQL SSRVFSQATL
201: VTLKLATNRS LIWINGDDVA AAHLPCLKTL WLDDVLVADV KVFVRLLSRC PILEELVMID MKWHNWEACF VVSASLRRLK IVWTDYVEMD EYDRCPQSVL
301: FDTPNVLYLE YTDHIAGQYP LLKFSSLIEA KIRLEMIDEK EEEDEGQEVI VGDNATAFIT GITSVRKLYL YANTIQVLHH YFDPPIPEFV YLTHLTIQSD
401: KELGWDAIPE LLSKCPHLET LVLEGLFHLA TDVCGDVCPC RRNMEQAISY LVKSPVTHLE IYEGVVGKKR GEVTEDAARF GEQVRWFLMR MLHLQQVKIY
501: GQTEDSVTAL YDIATELRRL EGKASPNVQI SVLQA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.