Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48198 | Canola | cytosol | 43.21 | 30.43 |
| CDY37900 | Canola | cytosol, extracellular, nucleus | 45.68 | 28.68 |
| CDX76220 | Canola | endoplasmic reticulum, extracellular | 35.8 | 19.21 |
| CDX88297 | Canola | cytosol | 49.38 | 17.02 |
| CDX92766 | Canola | cytosol | 39.51 | 15.38 |
| CDY13667 | Canola | extracellular, plasma membrane | 43.21 | 12.64 |
| CDY00432 | Canola | cytosol | 38.27 | 12.4 |
| CDX89785 | Canola | cytosol, extracellular, nucleus | 53.09 | 12.36 |
| CDY69654 | Canola | cytosol | 45.68 | 11.53 |
| CDY00181 | Canola | plasma membrane, plastid, vacuole | 53.09 | 10.09 |
| CDX87122 | Canola | cytosol | 46.91 | 10.05 |
| CDX93829 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 50.62 | 9.79 |
| CDX73615 | Canola | cytosol | 44.44 | 9.63 |
| CDX83662 | Canola | cytosol, plastid | 48.15 | 9.42 |
| CDY63198 | Canola | mitochondrion, plasma membrane | 53.09 | 9.39 |
| CDX95363 | Canola | cytosol | 48.15 | 9.31 |
| CDY65918 | Canola | cytosol | 48.15 | 9.11 |
| CDY23229 | Canola | cytosol | 48.15 | 9.09 |
| CDY23230 | Canola | cytosol | 48.15 | 9.09 |
| CDY72188 | Canola | cytosol | 48.15 | 9.09 |
| CDY48010 | Canola | cytosol | 48.15 | 8.69 |
| CDY65463 | Canola | cytosol, extracellular, nucleus | 17.28 | 8.64 |
| CDX89356 | Canola | cytosol, extracellular, mitochondrion, plastid | 38.27 | 8.52 |
| CDX78112 | Canola | cytosol | 44.44 | 8.41 |
| CDY48007 | Canola | plastid | 41.98 | 7.76 |
| CDX94363 | Canola | cytosol | 34.57 | 7.69 |
| CDY48199 | Canola | extracellular, plasma membrane, vacuole | 43.21 | 7.31 |
| CDX94344 | Canola | cytosol, peroxisome, plastid | 35.8 | 6.92 |
| CDX89345 | Canola | cytosol, peroxisome, plastid | 34.57 | 6.73 |
| CDY42742 | Canola | cytosol | 34.57 | 6.65 |
| CDX80649 | Canola | cytosol | 33.33 | 6.25 |
| CDX83661 | Canola | cytosol, mitochondrion, nucleus | 30.86 | 6.25 |
| CDY06036 | Canola | cytosol | 33.33 | 6.25 |
| CDY52334 | Canola | cytosol, nucleus, vacuole | 33.33 | 6.12 |
| CDY69799 | Canola | cytosol | 28.4 | 5.99 |
| CDX92699 | Canola | cytosol | 22.22 | 5.75 |
| CDY41819 | Canola | cytosol | 4.94 | 5.63 |
| CDY27513 | Canola | cytosol | 39.51 | 5.53 |
| CDY30423 | Canola | extracellular, golgi | 14.81 | 5.5 |
| CDX71951 | Canola | plastid | 35.8 | 5.47 |
| CDY01270 | Canola | extracellular, plasma membrane | 18.52 | 5.19 |
| CDY65306 | Canola | cytosol | 11.11 | 2.78 |
| CDX92764 | Canola | cytosol, nucleus, plasma membrane | 6.17 | 1.98 |
| CDX71950 | Canola | cytosol | 2.47 | 1.5 |
| AT3G26922.2 | Thale cress | cytosol | 2.47 | 0.65 |
| CDY37901 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY00182 | EnsemblPlantsGene:GSBRNA2T00109700001 | InterPro:FBD | PANTHER:PTHR32212 | PANTHER:PTHR32212:SF234 | PFAM:PF08387 |
| ProteinID:CDY00182 | ProteinID:CDY00182.1 | SEG:seg | UniParc:UPI0004EEC30F | MapMan:35.2 | : |
Description
BnaC09g01190D
Coordinates
chrLK031916:-:1187494..1187824
Molecular Weight (calculated)
9768.1 Da
IEP (calculated)
10.390
GRAVY (calculated)
-0.491
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MLDSSPKLQV LKLINKWLCE KNCLVAYKKW NREKNVYARL LLINLETFVW NGYKEHLEEE KVVVKYKLRN ANRLKRATFS P
001: MNRGGFSLYS KSCGQSLSNE DRISELPEAL LLQILSLLPT KKVVAMSVLS KRWRSLWKML PRLKFDDWMF PDNVNRCLLS HQASFLQSLH LVIDYDFVSH
101: MHTGILMGIA FGRHIRELVL YVNGFQESFT FPLSLCNCES LETLTLGHNV LIDVPSPVFL KSLRTLHLDG VEYTDDESVV NLLSGCISLE NLVVHRVIQA
201: DVTTFTIAVP SLKRLTLTTE FDDDEDSVYV INAPSLKYLK ILGDKAYLIE NSPELVEVSL TDRQVTVDGY PIASYVENLL RSLTSVKRMS LKISSYLEIK
301: FPTGSIFYQL VSLELYTNKA EWWNLLVLML DSSPKLQVLK LNGKLSGENN HLASMNWDQP KNIPGCLLFN LETFIWKGCK RIGEDEKEVA KYILRNTNRL
401: KRATFTREIY EENNSQDMFE NLEMVEELES VVRASKSCKL VFESTLWSLS NYDV
101: MHTGILMGIA FGRHIRELVL YVNGFQESFT FPLSLCNCES LETLTLGHNV LIDVPSPVFL KSLRTLHLDG VEYTDDESVV NLLSGCISLE NLVVHRVIQA
201: DVTTFTIAVP SLKRLTLTTE FDDDEDSVYV INAPSLKYLK ILGDKAYLIE NSPELVEVSL TDRQVTVDGY PIASYVENLL RSLTSVKRMS LKISSYLEIK
301: FPTGSIFYQL VSLELYTNKA EWWNLLVLML DSSPKLQVLK LNGKLSGENN HLASMNWDQP KNIPGCLLFN LETFIWKGCK RIGEDEKEVA KYILRNTNRL
401: KRATFTREIY EENNSQDMFE NLEMVEELES VVRASKSCKL VFESTLWSLS NYDV
Arabidopsis Description
Protein with RNI-like/FBD-like domain [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS0]
SUBAcon: [extracellular,peroxisome,plastid]
SUBAcon: [extracellular,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.