Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- peroxisome 1
- plasma membrane 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016099 | Potato | cytosol | 72.46 | 40.76 |
| PGSC0003DMT400016057 | Potato | cytosol | 67.63 | 37.53 |
| PGSC0003DMT400058829 | Potato | cytosol | 45.89 | 26.1 |
| PGSC0003DMT400012000 | Potato | plastid | 43.48 | 24.32 |
| Bra001187.1-P | Field mustard | cytosol | 26.09 | 20.38 |
| PGSC0003DMT400097507 | Potato | cytosol | 23.19 | 20.17 |
| PGSC0003DMT400090333 | Potato | cytosol | 28.5 | 19.03 |
| PGSC0003DMT400094202 | Potato | cytosol | 24.64 | 17.77 |
| PGSC0003DMT400076282 | Potato | nucleus | 13.53 | 17.72 |
| PGSC0003DMT400080292 | Potato | cytosol | 16.91 | 17.68 |
| PGSC0003DMT400080382 | Potato | golgi | 28.99 | 15.96 |
| PGSC0003DMT400092235 | Potato | cytosol | 24.64 | 15.41 |
| PGSC0003DMT400034123 | Potato | golgi | 27.05 | 15.26 |
| PGSC0003DMT400030295 | Potato | cytosol | 14.49 | 15.15 |
| PGSC0003DMT400009709 | Potato | cytosol | 27.54 | 15.08 |
| PGSC0003DMT400088797 | Potato | cytosol | 17.87 | 15.04 |
| PGSC0003DMT400031274 | Potato | extracellular, plasma membrane | 13.04 | 15.0 |
| PGSC0003DMT400080369 | Potato | nucleus | 28.02 | 14.54 |
| PGSC0003DMT400031977 | Potato | cytosol | 27.54 | 14.36 |
| PGSC0003DMT400009785 | Potato | cytosol | 26.09 | 14.25 |
| CDY08063 | Canola | cytosol | 27.54 | 14.18 |
| PGSC0003DMT400096882 | Potato | cytosol, plasma membrane, plastid | 18.84 | 14.13 |
| PGSC0003DMT400085500 | Potato | cytosol | 26.09 | 14.1 |
| PGSC0003DMT400008825 | Potato | extracellular, golgi, plastid | 25.12 | 14.05 |
| PGSC0003DMT400008824 | Potato | extracellular, golgi, plastid | 25.12 | 14.05 |
| PGSC0003DMT400055826 | Potato | cytosol, extracellular, plasma membrane | 22.71 | 14.03 |
| PGSC0003DMT400067303 | Potato | extracellular | 24.64 | 13.93 |
| PGSC0003DMT400093810 | Potato | plastid | 18.84 | 13.93 |
| PGSC0003DMT400076284 | Potato | cytosol | 28.5 | 13.92 |
| PGSC0003DMT400076216 | Potato | cytosol | 26.09 | 13.88 |
| AT3G06240.1 | Thale cress | cytosol | 28.5 | 13.82 |
| PGSC0003DMT400035180 | Potato | golgi, nucleus, plastid | 25.12 | 13.76 |
| PGSC0003DMT400009708 | Potato | cytosol, peroxisome, plastid | 21.74 | 13.72 |
| PGSC0003DMT400094422 | Potato | extracellular, golgi, plastid | 23.19 | 13.6 |
| PGSC0003DMT400096151 | Potato | cytosol | 26.09 | 13.57 |
| PGSC0003DMT400059327 | Potato | cytosol | 24.15 | 13.55 |
| PGSC0003DMT400055337 | Potato | plastid | 26.57 | 13.55 |
| PGSC0003DMT400080239 | Potato | cytosol, plastid | 20.77 | 13.48 |
| CDY58343 | Canola | cytosol | 26.09 | 13.37 |
| PGSC0003DMT400035091 | Potato | mitochondrion | 25.12 | 13.27 |
| PGSC0003DMT400015598 | Potato | cytosol, nucleus, peroxisome, plastid | 25.6 | 13.25 |
| PGSC0003DMT400058350 | Potato | cytosol, extracellular, plasma membrane, plastid | 23.67 | 13.24 |
| PGSC0003DMT400016504 | Potato | cytosol | 24.64 | 13.21 |
| PGSC0003DMT400076274 | Potato | cytosol | 24.64 | 13.18 |
| PGSC0003DMT400059337 | Potato | cytosol, plasma membrane | 23.67 | 13.17 |
| PGSC0003DMT400053926 | Potato | cytosol | 16.43 | 12.93 |
| PGSC0003DMT400090382 | Potato | cytosol | 23.67 | 12.76 |
| PGSC0003DMT400096925 | Potato | cytosol | 15.46 | 12.7 |
| PGSC0003DMT400076275 | Potato | nucleus | 24.15 | 12.44 |
| PGSC0003DMT400006240 | Potato | mitochondrion | 18.84 | 11.89 |
| PGSC0003DMT400046369 | Potato | cytosol | 22.71 | 11.63 |
| PGSC0003DMT400015653 | Potato | cytosol, plastid | 27.54 | 11.59 |
| PGSC0003DMT400095263 | Potato | cytosol | 14.98 | 11.4 |
| PGSC0003DMT400054287 | Potato | cytosol, extracellular, mitochondrion, plastid | 10.14 | 11.11 |
| PGSC0003DMT400059330 | Potato | extracellular | 20.29 | 11.11 |
| PGSC0003DMT400059329 | Potato | vacuole | 21.26 | 10.97 |
| PGSC0003DMT400025788 | Potato | cytosol | 20.77 | 10.97 |
| PGSC0003DMT400045556 | Potato | cytosol | 24.15 | 10.82 |
| PGSC0003DMT400059334 | Potato | plastid | 16.91 | 9.72 |
| PGSC0003DMT400053922 | Potato | extracellular, golgi | 18.84 | 9.33 |
| PGSC0003DMT400080293 | Potato | nucleus | 9.66 | 7.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400016096 | EnsemblPlantsGene:PGSC0003DMG400006292 | InterPro:F-box-assoc_interact_dom | PANTHER:PTHR44355 | PGSC:PGSC0003DMG400006292 | SEG:seg |
| TIGRFAMs:TIGR01640 | UniParc:UPI00029582B3 | UniProt:M1A734 | MapMan:35.2 | : | : |
Description
Ubiquitin-protein ligase [Source:PGSC_GENE;Acc:PGSC0003DMG400006292]
Coordinates
chr1:-:60425564..60426313
Molecular Weight (calculated)
23861.5 Da
IEP (calculated)
5.316
GRAVY (calculated)
-0.257
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGREKIHFL INPTTLKHHQ IPMFDSLLPL HRTCYMYGLG YDVVNDDYKV VVLSYPVKNK TVTCVYMYSV RKGLWEKLEN SPYDHSPFEP RSGVLVNEAL
101: HWLTRTTSEN STTIAAFDLS VDKFSEEYGV KESWTKFKIT VHVPLTTLLC SIGDDDVLLD ADEELAVYNM KENRRKDLLI DVKPLFYEGR TFVDSLVSPY
201: FGSETES
101: HWLTRTTSEN STTIAAFDLS VDKFSEEYGV KESWTKFKIT VHVPLTTLLC SIGDDDVLLD ADEELAVYNM KENRRKDLLI DVKPLFYEGR TFVDSLVSPY
201: FGSETES
001: MKAIQLLWEA IMEATKRERR REDDDGEKAS PESLVLPPEI ITEILLRLPA KSIGRFRCVS KLFCTLSSDP GFAKIHLDLI LRNESVRSLH RKLIVSSHNL
101: YSLDFNSIGD GIRDLAAVEH NYPLKDDPSI FSEMIRNYVG DHLYDDRRVM LKLNAKSYRR NWVEIVGSSN GLVCISPGEG AVFLYNPTTG DSKRLPENFR
201: PKSVEYERDN FQTYGFGFDG LTDDYKLVKL VATSEDILDA SVYSLKADSW RRICNLNYEH NDGSYTSGVH FNGAIHWVFT ESRHNQRVVV AFDIQTEEFR
301: EMPVPDEAED CSHRFSNFVV GSLNGRLCVV NSCYDVHDDI WVMSEYGEAK SWSRIRINLL YRSMKPLCST KNDEEVLLEL DGDLVLYNFE TNASSNLGIC
401: GVKLSDGFEA NTYVESLISP NSYGIES
101: YSLDFNSIGD GIRDLAAVEH NYPLKDDPSI FSEMIRNYVG DHLYDDRRVM LKLNAKSYRR NWVEIVGSSN GLVCISPGEG AVFLYNPTTG DSKRLPENFR
201: PKSVEYERDN FQTYGFGFDG LTDDYKLVKL VATSEDILDA SVYSLKADSW RRICNLNYEH NDGSYTSGVH FNGAIHWVFT ESRHNQRVVV AFDIQTEEFR
301: EMPVPDEAED CSHRFSNFVV GSLNGRLCVV NSCYDVHDDI WVMSEYGEAK SWSRIRINLL YRSMKPLCST KNDEEVLLEL DGDLVLYNFE TNASSNLGIC
401: GVKLSDGFEA NTYVESLISP NSYGIES
Arabidopsis Description
F-box/kelch-repeat protein At3g06240 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.