Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29709 | Soybean | cytosol | 95.26 | 95.26 |
| KRH10201 | Soybean | mitochondrion, nucleus, plastid | 55.86 | 76.19 |
| KRH23136 | Soybean | cytosol | 79.55 | 76.13 |
| VIT_06s0004g02040.t01 | Wine grape | nucleus | 73.82 | 66.52 |
| Solyc11g065880.1.1 | Tomato | nucleus | 69.08 | 66.43 |
| PGSC0003DMT400018998 | Potato | nucleus | 68.83 | 66.03 |
| AT5G19350.1 | Thale cress | cytosol | 68.08 | 64.24 |
| Os03t0174100-02 | Rice | nucleus | 65.34 | 62.98 |
| HORVU4Hr1G075700.5 | Barley | nucleus | 65.34 | 62.98 |
| TraesCS4A01G014200.1 | Wheat | nucleus | 65.09 | 62.74 |
| CDX92537 | Canola | nucleus | 64.59 | 61.81 |
| CDX70874 | Canola | cytosol, nucleus, peroxisome | 66.08 | 61.63 |
| Bra002230.1-P | Field mustard | nucleus | 64.34 | 61.58 |
| CDY13992 | Canola | nucleus | 64.34 | 61.58 |
| GSMUA_Achr8P31320_001 | Banana | nucleus | 61.35 | 61.5 |
| EER95414 | Sorghum | nucleus | 63.59 | 61.45 |
| CDX88893 | Canola | cytosol, nucleus, peroxisome | 65.84 | 61.4 |
| Bra006502.1-P | Field mustard | nucleus | 65.59 | 61.16 |
| TraesCS4D01G288600.1 | Wheat | nucleus | 64.84 | 56.89 |
| TraesCS4B01G289600.1 | Wheat | nucleus | 65.09 | 56.86 |
| KRH20867 | Soybean | nucleus | 46.88 | 45.97 |
| KRH51075 | Soybean | endoplasmic reticulum | 45.39 | 45.84 |
| KRH11417 | Soybean | nucleus | 46.88 | 45.74 |
| KRH02082 | Soybean | nucleus | 45.64 | 45.52 |
| KRH61258 | Soybean | nucleus | 44.14 | 43.28 |
| KRH05723 | Soybean | nucleus | 44.39 | 43.1 |
| KRH51956 | Soybean | nucleus | 43.89 | 42.82 |
| KRH15315 | Soybean | nucleus | 44.89 | 42.35 |
| KRH71168 | Soybean | nucleus | 42.64 | 39.68 |
| KRH50251 | Soybean | nucleus | 42.39 | 39.44 |
| Zm00001d027869_P002 | Maize | nucleus | 50.87 | 26.74 |
| KRH61952 | Soybean | mitochondrion | 26.18 | 24.71 |
| KRH52613 | Soybean | nucleus | 26.68 | 24.6 |
| KRH02581 | Soybean | mitochondrion | 23.44 | 22.76 |
| KRH06218 | Soybean | nucleus | 23.44 | 22.6 |
| KRH19347 | Soybean | mitochondrion, nucleus | 22.94 | 22.44 |
| KRH47641 | Soybean | nucleus | 23.19 | 22.04 |
| KRH27525 | Soybean | nucleus | 15.46 | 17.03 |
| KRH36396 | Soybean | endoplasmic reticulum | 15.46 | 16.99 |
| KRH32613 | Soybean | cytosol | 20.2 | 16.56 |
| KRH52023 | Soybean | cytosol, endoplasmic reticulum | 25.94 | 16.51 |
| KRH15385 | Soybean | nucleus | 26.68 | 16.41 |
| KRH05656 | Soybean | endoplasmic reticulum, nucleus | 26.68 | 16.36 |
| KRH61326 | Soybean | cytosol, endoplasmic reticulum | 25.69 | 16.35 |
| KRH19986 | Soybean | cytosol | 19.95 | 16.16 |
| KRH50336 | Soybean | cytosol | 26.18 | 16.13 |
| KRH70673 | Soybean | nucleus | 25.94 | 16.05 |
| KRH70233 | Soybean | cytosol | 24.44 | 15.58 |
| KRH08608 | Soybean | endoplasmic reticulum | 24.94 | 15.02 |
| KRG91724 | Soybean | cytosol | 24.19 | 14.88 |
| KRG96088 | Soybean | cytosol | 22.44 | 14.15 |
| KRH67800 | Soybean | cytosol | 21.7 | 13.77 |
Protein Annotations
| EntrezGene:100813616 | MapMan:16.9.4 | Gene3D:3.30.70.330 | EMBL:ACUP02007184 | EnsemblPlantsGene:GLYMA_12G057300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1LQJ1 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH24702 | ProteinID:KRH24702 | ProteinID:KRH24702.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR43955 | PANTHER:PTHR43955:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000196265F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:4173101..4176586
Molecular Weight (calculated)
44136.7 Da
IEP (calculated)
4.941
GRAVY (calculated)
-0.314
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MVATAIEEVR TLWIGDLQYW VDESYLSQCF AHSGEVVSIK IIRNKLTGQP EGYGFVEFVS HASAEAFLRT FNGAQMPGTD QTFRLNWASF GDSGPDHSIF
101: VGDLAPDVTD FILQETFRAH YPSVKGSKVV TDPATGRSKG YGFVKFADEA QRNRAMTEMN GVYCSTRPMR ISAATPKKNA SFQHQYAPPK AMYQFPAYTA
201: PVSTVAPEND VNNTTVCIGN LDLNVTEEEL KQAFVQFGDI VLVKIYAGKG YGYVQFGTRA SAEDAIQRMQ GKVIGQQVIQ ISWGSTLTAR QDVPGGWGAQ
301: MDPSQWSAYY GYGQGYESYA YGATHDPSLY AYGAYAGYAQ YPQNVEGAQD MSAVSMPMEE LYDPLAMPDV DKLNAAYLSI HGSSILGRSL WQRTSQSLQQ
401: A
101: VGDLAPDVTD FILQETFRAH YPSVKGSKVV TDPATGRSKG YGFVKFADEA QRNRAMTEMN GVYCSTRPMR ISAATPKKNA SFQHQYAPPK AMYQFPAYTA
201: PVSTVAPEND VNNTTVCIGN LDLNVTEEEL KQAFVQFGDI VLVKIYAGKG YGYVQFGTRA SAEDAIQRMQ GKVIGQQVIQ ISWGSTLTAR QDVPGGWGAQ
301: MDPSQWSAYY GYGQGYESYA YGATHDPSLY AYGAYAGYAQ YPQNVEGAQD MSAVSMPMEE LYDPLAMPDV DKLNAAYLSI HGSSILGRSL WQRTSQSLQQ
401: A
001: MMQQPPPGGI LPHHAPPPSA QQQYGYQQPY GIAGAAPPPP QMWNPQAAAP PSVQPTTADE IRTLWIGDLQ YWMDENFLYG CFAHTGEMVS AKVIRNKQTG
101: QVEGYGFIEF ASHAAAERVL QTFNNAPIPS FPDQLFRLNW ASLSSGDKRD DSPDYTIFVG DLAADVTDYI LLETFRASYP SVKGAKVVID RVTGRTKGYG
201: FVRFSDESEQ IRAMTEMNGV PCSTRPMRIG PAASKKGVTG QRDSYQSSAA GVTTDNDPNN TTVFVGGLDA SVTDDHLKNV FSQYGEIVHV KIPAGKRCGF
301: VQFSEKSCAE EALRMLNGVQ LGGTTVRLSW GRSPSNKQSG DPSQFYYGGY GQGQEQYGYT MPQDPNAYYG GYSGGGYSGG YQQTPQAGQQ PPQQPPQQQQ
401: VGFSY
101: QVEGYGFIEF ASHAAAERVL QTFNNAPIPS FPDQLFRLNW ASLSSGDKRD DSPDYTIFVG DLAADVTDYI LLETFRASYP SVKGAKVVID RVTGRTKGYG
201: FVRFSDESEQ IRAMTEMNGV PCSTRPMRIG PAASKKGVTG QRDSYQSSAA GVTTDNDPNN TTVFVGGLDA SVTDDHLKNV FSQYGEIVHV KIPAGKRCGF
301: VQFSEKSCAE EALRMLNGVQ LGGTTVRLSW GRSPSNKQSG DPSQFYYGGY GQGQEQYGYT MPQDPNAYYG GYSGGGYSGG YQQTPQAGQQ PPQQPPQQQQ
401: VGFSY
Arabidopsis Description
RBP45BRBP45B [Source:UniProtKB/TrEMBL;Acc:A0A178WLD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.