Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50251 | Soybean | nucleus | 94.9 | 94.9 |
| VIT_03s0063g00850.t01 | Wine grape | nucleus | 69.14 | 71.98 |
| Solyc01g108500.2.1 | Tomato | nucleus | 66.13 | 69.01 |
| GSMUA_Achr9P15210_001 | Banana | nucleus | 48.96 | 67.63 |
| PGSC0003DMT400066648 | Potato | nucleus | 65.2 | 66.9 |
| GSMUA_Achr3P06840_001 | Banana | nucleus | 47.33 | 65.38 |
| Bra018813.1-P | Field mustard | mitochondrion, nucleus | 57.77 | 63.85 |
| GSMUA_Achr10P... | Banana | nucleus | 46.4 | 63.69 |
| Solyc10g050860.1.1 | Tomato | nucleus | 63.11 | 63.55 |
| GSMUA_Achr6P10190_001 | Banana | nucleus | 45.48 | 62.62 |
| CDY16528 | Canola | nucleus | 61.25 | 62.26 |
| CDY32840 | Canola | nucleus | 60.79 | 62.23 |
| TraesCS5B01G241400.1 | Wheat | nucleus | 48.96 | 61.7 |
| TraesCS5D01G250100.1 | Wheat | nucleus | 48.96 | 61.7 |
| KRH61258 | Soybean | nucleus | 58.47 | 61.61 |
| CDY29341 | Canola | nucleus | 59.86 | 61.58 |
| TraesCS5A01G243500.1 | Wheat | nucleus | 48.72 | 61.4 |
| CDY68866 | Canola | nucleus | 58.93 | 61.2 |
| CDY50959 | Canola | nucleus | 61.02 | 61.16 |
| CDY28101 | Canola | nucleus | 60.56 | 60.84 |
| CDX92304 | Canola | nucleus | 59.63 | 60.61 |
| Bra022389.1-P | Field mustard | nucleus | 59.63 | 60.33 |
| CDX99265 | Canola | nucleus | 59.16 | 60.14 |
| KRH05723 | Soybean | nucleus | 57.54 | 60.05 |
| Bra040663.1-P | Field mustard | nucleus | 51.74 | 59.95 |
| AT3G19130.1 | Thale cress | nucleus | 60.32 | 59.77 |
| CDY22988 | Canola | nucleus | 57.77 | 59.29 |
| CDY18570 | Canola | nucleus | 59.63 | 59.22 |
| KRH51956 | Soybean | nucleus | 56.38 | 59.12 |
| KRH15315 | Soybean | nucleus | 58.24 | 59.06 |
| Bra001735.1-P | Field mustard | nucleus | 56.15 | 58.74 |
| CDX82310 | Canola | nucleus | 56.15 | 58.74 |
| CDX95462 | Canola | nucleus | 58.93 | 58.53 |
| GSMUA_Achr6P09470_001 | Banana | nucleus | 19.49 | 57.14 |
| Os02t0567900-01 | Rice | cytosol, nucleus | 34.11 | 56.76 |
| Bra037538.1-P | Field mustard | nucleus | 51.74 | 55.34 |
| KRH51075 | Soybean | endoplasmic reticulum | 50.81 | 55.16 |
| KRH02082 | Soybean | nucleus | 51.04 | 54.73 |
| AT1G49600.3 | Thale cress | nucleus | 57.08 | 54.67 |
| KRH20867 | Soybean | nucleus | 51.28 | 54.03 |
| TraesCS6A01G204400.1 | Wheat | mitochondrion | 47.33 | 53.83 |
| GSMUA_Achr3P01720_001 | Banana | mitochondrion | 50.12 | 53.6 |
| KRH11417 | Soybean | nucleus | 51.04 | 53.53 |
| KXG35789 | Sorghum | nucleus | 54.29 | 53.42 |
| Zm00001d005912_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 52.44 | 53.3 |
| HORVU5Hr1G069180.3 | Barley | nucleus, peroxisome, plastid | 53.36 | 53.12 |
| Zm00001d020748_P002 | Maize | plasma membrane | 53.13 | 52.89 |
| Os04t0449900-01 | Rice | plastid | 47.1 | 52.45 |
| Os09t0462700-01 | Rice | mitochondrion, nucleus, plastid | 51.04 | 49.89 |
| HORVU6Hr1G048390.1 | Barley | cytoskeleton, nucleus, peroxisome | 47.56 | 49.16 |
| TraesCS6D01G184600.1 | Wheat | cytosol, nucleus, plastid | 47.1 | 48.68 |
| TraesCS2B01G335700.1 | Wheat | plastid | 47.33 | 48.57 |
| TraesCS2D01G315400.2 | Wheat | plastid | 47.56 | 48.35 |
| TraesCS2A01G317700.2 | Wheat | plastid | 47.56 | 48.35 |
| EES10898 | Sorghum | nucleus | 47.1 | 47.99 |
| KRH23136 | Soybean | cytosol | 45.01 | 46.3 |
| HORVU2Hr1G078910.4 | Barley | mitochondrion, nucleus | 45.71 | 46.14 |
| EES05289 | Sorghum | plastid | 46.17 | 45.75 |
| Zm00001d050838_P001 | Maize | plastid | 45.48 | 45.58 |
| TraesCS6B01G228100.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 47.33 | 44.74 |
| KRH29709 | Soybean | cytosol | 40.6 | 43.64 |
| Zm00001d025551_P002 | Maize | plastid | 45.48 | 43.36 |
| KRH24702 | Soybean | nucleus | 39.68 | 42.64 |
| Zm00001d016897_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome, plastid | 45.24 | 41.14 |
| Bra014216.1-P | Field mustard | nucleus | 53.13 | 40.03 |
| KRH10201 | Soybean | mitochondrion, nucleus, plastid | 25.99 | 38.1 |
| KRH52613 | Soybean | nucleus | 27.61 | 27.36 |
| KRH61952 | Soybean | mitochondrion | 26.45 | 26.82 |
| KRH47641 | Soybean | nucleus | 25.75 | 26.3 |
| KRH06218 | Soybean | nucleus | 24.83 | 25.72 |
| KRH02581 | Soybean | mitochondrion | 23.9 | 24.94 |
| KRH19347 | Soybean | mitochondrion, nucleus | 22.97 | 24.15 |
| KRH32613 | Soybean | cytosol | 20.88 | 18.4 |
| KRH19986 | Soybean | cytosol | 21.11 | 18.38 |
| KRH27525 | Soybean | nucleus | 14.15 | 16.76 |
| KRH36396 | Soybean | endoplasmic reticulum | 14.15 | 16.71 |
| KRH70233 | Soybean | cytosol | 22.74 | 15.58 |
| KRH52023 | Soybean | cytosol, endoplasmic reticulum | 22.27 | 15.24 |
| KRH61326 | Soybean | cytosol, endoplasmic reticulum | 22.27 | 15.24 |
| KRH67800 | Soybean | cytosol | 22.27 | 15.19 |
| KRH70673 | Soybean | nucleus | 22.74 | 15.12 |
| KRH50336 | Soybean | cytosol | 22.74 | 15.05 |
| KRH15385 | Soybean | nucleus | 22.74 | 15.03 |
| KRH05656 | Soybean | endoplasmic reticulum, nucleus | 22.51 | 14.83 |
| KRG96088 | Soybean | cytosol | 21.58 | 14.62 |
| KRG91724 | Soybean | cytosol | 21.81 | 14.42 |
| KRH08608 | Soybean | endoplasmic reticulum | 21.81 | 14.11 |
Protein Annotations
| EntrezGene:100798089 | MapMan:16.9.4 | Gene3D:3.30.70.330 | EMBL:ACUP02000874 | EnsemblPlantsGene:GLYMA_02G134400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1JEW3 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH71168 | ProteinID:KRH71168 | ProteinID:KRH71168.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR43955 | PANTHER:PTHR43955:SF6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0002337B5D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:13895392..13900034
Molecular Weight (calculated)
47347.0 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.672
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQPSSNGDL NNNQQQGQVQ QQQQQGQWAA AAQPHQYQQQ WMAMQYPATA MAMMQQQMLM YPQHYMPYAH PHYPPPPPPP PSSHHHHHHK QAAASSDEIR
101: TVWLGDLHHW MDENYLHNCF AHTGEVVSAK VIRNKQTGQS EGYGFVEFYS RGTAEKVLQN YNGTMMPNTD QAFRLNWATF SAGERRSSDA TSDLSIFVGD
201: LAIDVTDAML QDTFAGRYSS IKGAKVVIDS NTGRSKGYGF VRFGDENERT RAMTEMNGVY CSSRPMRIGV ATPKKTYGFQ QQYSSQAVVL AGGHSANGAV
301: AQGSHSEGDI NNTTIFVGGL DSDTSDEDLR QPFLQFGEVV SVKIPVGKGC GFVQFADRKN AEEAIQGLNG TVIGKQTVRL SWGRSPGNKH WRSDSNGGHY
401: GGHQGYGGHG FAVRQNQDIA MQPAAAIQGA S
101: TVWLGDLHHW MDENYLHNCF AHTGEVVSAK VIRNKQTGQS EGYGFVEFYS RGTAEKVLQN YNGTMMPNTD QAFRLNWATF SAGERRSSDA TSDLSIFVGD
201: LAIDVTDAML QDTFAGRYSS IKGAKVVIDS NTGRSKGYGF VRFGDENERT RAMTEMNGVY CSSRPMRIGV ATPKKTYGFQ QQYSSQAVVL AGGHSANGAV
301: AQGSHSEGDI NNTTIFVGGL DSDTSDEDLR QPFLQFGEVV SVKIPVGKGC GFVQFADRKN AEEAIQGLNG TVIGKQTVRL SWGRSPGNKH WRSDSNGGHY
401: GGHQGYGGHG FAVRQNQDIA MQPAAAIQGA S
001: MQTTNGSDST LATSGATPPN QQTPPPPQQW QQQQQQQQQW MAAMQYPPAA AMMMMQQQQM LMYPHQYVPY NQGPYQQHHP QLHQYGSYQQ HQHQQHKAID
101: RGSGDDVKTL WVGDLLHWMD ETYLHSCFSH TGEVSSVKVI RNKLTSQSEG YGFVEFLSRA AAEEVLQNYS GSVMPNSDQP FRINWASFST GEKRAVENGP
201: DLSVFVGDLS PDVTDVLLHE TFSDRYPSVK SAKVVIDSNT GRSKGYGFVR FGDENERSRA LTEMNGAYCS NRQMRVGIAT PKRAIANQQQ HSSQAVILAG
301: GHGSNGSMGY GSQSDGESTN ATIFVGGIDP DVIDEDLRQP FSQFGEVVSV KIPVGKGCGF VQFADRKSAE DAIESLNGTV IGKNTVRLSW GRSPNKQWRG
401: DSGQQWNGGY SRGHGYNNGG GYANHHDSNN YHGEN
101: RGSGDDVKTL WVGDLLHWMD ETYLHSCFSH TGEVSSVKVI RNKLTSQSEG YGFVEFLSRA AAEEVLQNYS GSVMPNSDQP FRINWASFST GEKRAVENGP
201: DLSVFVGDLS PDVTDVLLHE TFSDRYPSVK SAKVVIDSNT GRSKGYGFVR FGDENERSRA LTEMNGAYCS NRQMRVGIAT PKRAIANQQQ HSSQAVILAG
301: GHGSNGSMGY GSQSDGESTN ATIFVGGIDP DVIDEDLRQP FSQFGEVVSV KIPVGKGCGF VQFADRKSAE DAIESLNGTV IGKNTVRLSW GRSPNKQWRG
401: DSGQQWNGGY SRGHGYNNGG GYANHHDSNN YHGEN
Arabidopsis Description
RBP47BPolyadenylate-binding protein RBP47B [Source:UniProtKB/Swiss-Prot;Acc:Q0WW84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.