Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05723 | Soybean | nucleus | 93.41 | 96.13 |
| KRH61258 | Soybean | nucleus | 80.94 | 84.11 |
| KRH51956 | Soybean | nucleus | 79.29 | 82.0 |
| VIT_18s0001g11080.t01 | Wine grape | nucleus | 76.0 | 77.27 |
| GSMUA_Achr9P15210_001 | Banana | nucleus | 54.35 | 74.04 |
| PGSC0003DMT400020621 | Potato | nucleus | 68.94 | 73.99 |
| GSMUA_Achr3P06840_001 | Banana | nucleus | 52.94 | 72.12 |
| GSMUA_Achr10P... | Banana | nucleus | 52.24 | 70.7 |
| TraesCS5A01G243500.1 | Wheat | nucleus | 56.71 | 70.47 |
| TraesCS5B01G241400.1 | Wheat | nucleus | 56.71 | 70.47 |
| TraesCS5D01G250100.1 | Wheat | nucleus | 56.47 | 70.18 |
| GSMUA_Achr6P10190_001 | Banana | nucleus | 51.29 | 69.65 |
| Bra027446.1-P | Field mustard | cytosol | 50.35 | 66.88 |
| Solyc04g079310.2.1 | Tomato | nucleus | 69.65 | 65.63 |
| Os02t0567900-01 | Rice | cytosol, nucleus | 38.82 | 63.71 |
| KXG35789 | Sorghum | nucleus | 64.24 | 62.33 |
| Zm00001d020748_P002 | Maize | plasma membrane | 63.06 | 61.89 |
| CDY06734 | Canola | mitochondrion | 44.0 | 61.31 |
| HORVU5Hr1G069180.3 | Barley | nucleus, peroxisome, plastid | 62.35 | 61.2 |
| Zm00001d005912_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 60.47 | 60.61 |
| AT1G47490.1 | Thale cress | nucleus | 61.18 | 60.19 |
| TraesCS6A01G204400.1 | Wheat | mitochondrion | 53.41 | 59.89 |
| AT1G47500.1 | Thale cress | nucleus | 60.71 | 59.45 |
| CDY52067 | Canola | nucleus | 58.12 | 58.95 |
| CDX95176 | Canola | nucleus | 57.65 | 58.47 |
| GSMUA_Achr3P01720_001 | Banana | mitochondrion | 55.29 | 58.31 |
| KRH71168 | Soybean | nucleus | 59.06 | 58.24 |
| Os04t0449900-01 | Rice | plastid | 52.94 | 58.14 |
| KRH50251 | Soybean | nucleus | 58.82 | 58.0 |
| GSMUA_Achr6P09470_001 | Banana | nucleus | 19.76 | 57.14 |
| Os09t0462700-01 | Rice | mitochondrion, nucleus, plastid | 58.82 | 56.69 |
| HORVU6Hr1G048390.1 | Barley | cytoskeleton, nucleus, peroxisome | 54.59 | 55.64 |
| TraesCS6D01G184600.1 | Wheat | cytosol, nucleus, plastid | 53.88 | 54.92 |
| EES10898 | Sorghum | nucleus | 54.12 | 54.37 |
| TraesCS2B01G335700.1 | Wheat | plastid | 53.18 | 53.81 |
| TraesCS2D01G315400.2 | Wheat | plastid | 53.65 | 53.77 |
| TraesCS2A01G317700.2 | Wheat | plastid | 53.65 | 53.77 |
| KRH02082 | Soybean | nucleus | 49.41 | 52.24 |
| KRH51075 | Soybean | endoplasmic reticulum | 48.71 | 52.14 |
| EES05289 | Sorghum | plastid | 53.18 | 51.95 |
| KRH20867 | Soybean | nucleus | 49.88 | 51.83 |
| Zm00001d050838_P001 | Maize | plastid | 52.24 | 51.63 |
| KRH11417 | Soybean | nucleus | 49.88 | 51.58 |
| TraesCS6B01G228100.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 54.35 | 50.66 |
| HORVU2Hr1G078910.4 | Barley | mitochondrion, nucleus | 50.59 | 50.35 |
| Zm00001d025551_P002 | Maize | plastid | 52.47 | 49.34 |
| Zm00001d016897_P002 | Maize | endoplasmic reticulum, nucleus, peroxisome, plastid | 52.94 | 47.47 |
| KRH23136 | Soybean | cytosol | 46.12 | 46.78 |
| KRH29709 | Soybean | cytosol | 43.76 | 46.38 |
| KRH24702 | Soybean | nucleus | 42.35 | 44.89 |
| KRH10201 | Soybean | mitochondrion, nucleus, plastid | 28.0 | 40.48 |
| KRH06218 | Soybean | nucleus | 24.71 | 25.24 |
| KRH47641 | Soybean | nucleus | 24.94 | 25.12 |
| KRH61952 | Soybean | mitochondrion | 24.47 | 24.47 |
| KRH52613 | Soybean | nucleus | 24.94 | 24.37 |
| KRH02581 | Soybean | mitochondrion | 23.53 | 24.21 |
| KRH19347 | Soybean | mitochondrion, nucleus | 23.29 | 24.15 |
| KRH19986 | Soybean | cytosol | 19.76 | 16.97 |
| KRH32613 | Soybean | cytosol | 19.06 | 16.56 |
| KRH27525 | Soybean | nucleus | 13.65 | 15.93 |
| KRH36396 | Soybean | endoplasmic reticulum | 13.65 | 15.89 |
| KRH70233 | Soybean | cytosol | 22.35 | 15.1 |
| KRG91724 | Soybean | cytosol | 22.59 | 14.72 |
| KRH61326 | Soybean | cytosol, endoplasmic reticulum | 21.65 | 14.6 |
| KRH52023 | Soybean | cytosol, endoplasmic reticulum | 21.65 | 14.6 |
| KRH67800 | Soybean | cytosol | 21.65 | 14.56 |
| KRH15385 | Soybean | nucleus | 22.12 | 14.42 |
| KRH50336 | Soybean | cytosol | 21.65 | 14.13 |
| KRH05656 | Soybean | endoplasmic reticulum, nucleus | 21.65 | 14.07 |
| KRH70673 | Soybean | nucleus | 21.18 | 13.89 |
| KRG96088 | Soybean | cytosol | 20.71 | 13.84 |
| KRH08608 | Soybean | endoplasmic reticulum | 21.65 | 13.81 |
Protein Annotations
| EntrezGene:100819523 | MapMan:16.9.4 | Gene3D:3.30.70.330 | EMBL:ACUP02008578 | EnsemblPlantsGene:GLYMA_14G080600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1M8J4 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH15315 | ProteinID:KRH15315 | ProteinID:KRH15315.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR43955 | PANTHER:PTHR43955:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0001962604 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:6972511..6976720
Molecular Weight (calculated)
47000.6 Da
IEP (calculated)
7.658
GRAVY (calculated)
-0.705
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQSNGSDSS TTEQKAPPPR QSPAVARPQQ WLPMQYPAAA MVMPHHMLPP QHYAPPPYVP FHHHHHHHQY AAPHVPNQHQ QQQQHHHHQN GSGGENKTIW
101: IGDLHHWMDE NYLHRCFAST GEISSIKVIR NKQTGLSEGY GFVEFYSHAT AEKVLQNYAG ILMPNTEQPF RLNWATFSTG DKGSDNVPDL SIFVGDLAAD
201: VTDSLLHETF ASVYPSVKAA KVVFDANTGR SKGYGFVRFG DDNQRTQAMT QMNGVYCSSR PMRIGAATPR KSSGHQQGGQ SNGTANQSEA DSTNTTIFVG
301: GLDPNVSDED LRQPFSQYGE IVSVKIPVGK GCGFVQFANR NNAEEALQKL NGTSIGKQTV RLSWGRNPAN KQFRMDFGNP WTGAYYGAPM YDGYGYALTP
401: RHDPSIYAAA YGAYPLYGGH QQQVS
101: IGDLHHWMDE NYLHRCFAST GEISSIKVIR NKQTGLSEGY GFVEFYSHAT AEKVLQNYAG ILMPNTEQPF RLNWATFSTG DKGSDNVPDL SIFVGDLAAD
201: VTDSLLHETF ASVYPSVKAA KVVFDANTGR SKGYGFVRFG DDNQRTQAMT QMNGVYCSSR PMRIGAATPR KSSGHQQGGQ SNGTANQSEA DSTNTTIFVG
301: GLDPNVSDED LRQPFSQYGE IVSVKIPVGK GCGFVQFANR NNAEEALQKL NGTSIGKQTV RLSWGRNPAN KQFRMDFGNP WTGAYYGAPM YDGYGYALTP
401: RHDPSIYAAA YGAYPLYGGH QQQVS
001: MADVKIQSES ESSDSHPVVD NQPPPPPPPP QQPAKEEENQ PKTSPTPPPH WMRYPPTVII PHQMMYAPPP FPPYHQYPNH HHLHHQSRGN KHQNAFNGEN
101: KTIWVGDLHH WMDEAYLNSS FASGDEREIV SVKVIRNKNN GLSEGYGFVE FESHDVADKV LREFNGTTMP NTDQPFRLNW ASFSTGEKRL ENNGPDLSIF
201: VGDLSPDVSD NLLHETFSEK YPSVKAAKVV LDANTGRSKG YGFVRFGDEN ERTKAMTEMN GVKCSSRAMR IGPATPRKTN GYQQQGGYMP NGTLTRPEGD
301: IMNTTIFVGG LDSSVTDEDL KQPFNEFGEI VSVKIPVGKG CGFVQFVNRP NAEEALEKLN GTVIGKQTVR LSWGRNPANK QPRDKYGNQW VDPYYGGQFY
401: NGYGYMVPQP DPRMYPAAPY YPMYGGHQQQ VS
101: KTIWVGDLHH WMDEAYLNSS FASGDEREIV SVKVIRNKNN GLSEGYGFVE FESHDVADKV LREFNGTTMP NTDQPFRLNW ASFSTGEKRL ENNGPDLSIF
201: VGDLSPDVSD NLLHETFSEK YPSVKAAKVV LDANTGRSKG YGFVRFGDEN ERTKAMTEMN GVKCSSRAMR IGPATPRKTN GYQQQGGYMP NGTLTRPEGD
301: IMNTTIFVGG LDSSVTDEDL KQPFNEFGEI VSVKIPVGKG CGFVQFVNRP NAEEALEKLN GTVIGKQTVR LSWGRNPANK QPRDKYGNQW VDPYYGGQFY
401: NGYGYMVPQP DPRMYPAAPY YPMYGGHQQQ VS
Arabidopsis Description
RBP47CPolyadenylate-binding protein RBP47C [Source:UniProtKB/Swiss-Prot;Acc:Q9SX79]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.