Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003368.1-P | Field mustard | cytosol | 61.11 | 97.06 |
| CDX98357 | Canola | cytosol | 91.67 | 85.84 |
| AT3G59270.1 | Thale cress | cytosol | 70.06 | 67.76 |
| CDX67785 | Canola | cytosol | 28.7 | 48.44 |
| CDX71909 | Canola | cytosol | 55.25 | 35.03 |
| CDX67782 | Canola | cytosol | 45.99 | 34.17 |
| CDX98353 | Canola | cytosol | 40.74 | 30.28 |
| CDX98355 | Canola | cytosol | 38.58 | 29.62 |
| CDX67783 | Canola | cytosol | 38.89 | 29.51 |
| CDX98354 | Canola | cytosol | 38.27 | 29.11 |
| CDY57500 | Canola | cytosol | 37.65 | 25.74 |
| CDX98340 | Canola | cytosol | 16.98 | 25.11 |
| CDY65605 | Canola | cytosol | 21.3 | 24.91 |
| CDX98342 | Canola | cytosol | 29.94 | 24.62 |
| CDX67768 | Canola | cytosol | 30.86 | 24.51 |
| CDX76838 | Canola | cytosol | 33.95 | 23.97 |
| CDY34798 | Canola | peroxisome | 33.33 | 23.53 |
| CDX98334 | Canola | golgi, mitochondrion, plasma membrane | 22.84 | 23.42 |
| CDX98339 | Canola | cytosol, extracellular | 29.63 | 23.41 |
| CDY06017 | Canola | nucleus | 41.67 | 23.32 |
| CDX67769 | Canola | cytosol | 29.94 | 23.26 |
| CDX67770 | Canola | cytosol | 28.09 | 23.21 |
| CDX98338 | Canola | cytosol | 28.7 | 22.85 |
| CDY00593 | Canola | cytosol | 25.93 | 22.76 |
| CDY18865 | Canola | plastid | 20.99 | 22.37 |
| CDY29185 | Canola | cytosol | 29.32 | 22.25 |
| CDY59410 | Canola | cytosol | 34.26 | 21.94 |
| CDY58541 | Canola | cytosol | 30.86 | 21.88 |
| CDY33289 | Canola | cytosol | 33.95 | 21.74 |
| CDY49258 | Canola | cytosol | 31.79 | 21.59 |
| CDX84742 | Canola | cytosol | 30.25 | 21.54 |
| CDY65604 | Canola | cytosol | 31.17 | 20.87 |
| CDY06019 | Canola | cytosol | 54.94 | 20.55 |
| CDY65456 | Canola | peroxisome | 30.56 | 20.33 |
| CDX95484 | Canola | cytosol | 21.91 | 20.17 |
| CDY67935 | Canola | cytosol | 26.85 | 19.64 |
| CDY50412 | Canola | cytosol, nucleus, peroxisome | 25.93 | 18.96 |
| CDY29195 | Canola | cytosol | 29.94 | 18.0 |
| CDX89015 | Canola | cytosol | 25.62 | 17.51 |
| CDY07824 | Canola | cytosol | 28.7 | 16.97 |
| CDX98352 | Canola | cytosol, nucleus, plasma membrane | 39.51 | 16.86 |
| CDX67781 | Canola | cytosol | 40.43 | 16.73 |
| CDY29196 | Canola | cytosol | 28.09 | 16.55 |
| CDX89484 | Canola | cytosol | 31.48 | 16.43 |
| CDY29197 | Canola | cytosol | 28.7 | 16.17 |
| CDY07822 | Canola | cytosol | 29.32 | 16.05 |
| CDY00610 | Canola | mitochondrion | 25.31 | 15.62 |
| CDX67786 | Canola | cytosol | 8.33 | 15.17 |
| CDY07837 | Canola | cytosol | 25.0 | 14.89 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 12.35 | 9.73 |
Protein Annotations
| EnsemblPlants:CDX67788 | EnsemblPlantsGene:GSBRNA2T00098981001 | Gene3D:3.80.10.10 | InterPro:FBD | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| PANTHER:PTHR31639 | PANTHER:PTHR31639:SF6 | ProteinID:CDX67788 | ProteinID:CDX67788.1 | SMART:SM00579 | SUPFAM:SSF52047 |
| UniParc:UPI0004EF437D | MapMan:35.1 | : | : | : | : |
Description
BnaA07g18280D
Coordinates
chrLK031787:-:2253142..2254667
Molecular Weight (calculated)
37303.1 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.196
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLEFDDSIR MHPGVRRQER DKIRRCFIRL VDSKLDLHRN GPLNRLSIKC KDDVGPAPVI RWISKVLNRH VTELVLNISS HWSWPLSSEV DSSVTMCQEF
101: WESCSVSSIT LKRLTYLSKR EFSFTYDDIA KEKEGTMVGN ATVLLMGICN VKKLYLSDNT LEVLAFCCKP MPVYNNLVHL TIKTHPNVEW ESLTALLKNC
201: QNLETLVFEG LLHRYGMNCG SGECLCKPWE EEEVPTCLSS SPVKILEIMK FGDICEDEDM DKMMEQVEYF LETMPNLEQL IIHFETDIDE DVLEVLSQFQ
301: MVSREGLSKC KIQVISDNLN LSST
101: WESCSVSSIT LKRLTYLSKR EFSFTYDDIA KEKEGTMVGN ATVLLMGICN VKKLYLSDNT LEVLAFCCKP MPVYNNLVHL TIKTHPNVEW ESLTALLKNC
201: QNLETLVFEG LLHRYGMNCG SGECLCKPWE EEEVPTCLSS SPVKILEIMK FGDICEDEDM DKMMEQVEYF LETMPNLEQL IIHFETDIDE DVLEVLSQFQ
301: MVSREGLSKC KIQVISDNLN LSST
001: MNLDFDDSKR MHYGVTKQER VKMLQRFIKR VDGKLALCKN VPLNRFSIKC KDDVGPAPVI GWITNVLKRR VSELALDISS CWDWPMSTAI DGCNTMVQEF
101: WESCSVSSTS LKRLTYLKAN FDSLVEARLD LQMTHDQIHK AKFSADDPIQ HEGLVGNATV FFIGICNVRS LYLSYNTLEP LPVFNNLIQL TVKTDRLVGW
201: ESLTALLKNS PNLETLVFEG LLHRYDMKCQ SSDECLCKPW EEENIPTCLS LSPVKVLKIM KFGDIDEDED MDKMMDQVEY FLETMPNLEQ LIIHYETSID
301: EDVEEVLSQF QMVPREGLTE CRIQVISDNL VLSSI
101: WESCSVSSTS LKRLTYLKAN FDSLVEARLD LQMTHDQIHK AKFSADDPIQ HEGLVGNATV FFIGICNVRS LYLSYNTLEP LPVFNNLIQL TVKTDRLVGW
201: ESLTALLKNS PNLETLVFEG LLHRYDMKCQ SSDECLCKPW EEENIPTCLS LSPVKVLKIM KFGDIDEDED MDKMMDQVEY FLETMPNLEQ LIIHYETSID
301: EDVEEVLSQF QMVPREGLTE CRIQVISDNL VLSSI
Arabidopsis Description
FBD-like domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9LX44]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.