Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57500 | Canola | cytosol | 77.03 | 94.09 |
| AT3G59200.1 | Thale cress | cytosol | 57.34 | 63.85 |
| CDX98353 | Canola | cytosol | 41.28 | 54.82 |
| CDX67782 | Canola | cytosol | 40.59 | 53.9 |
| CDX67783 | Canola | cytosol | 38.0 | 51.52 |
| CDX98354 | Canola | cytosol | 37.65 | 51.17 |
| CDX98355 | Canola | cytosol | 36.96 | 50.71 |
| CDX67786 | Canola | cytosol | 15.54 | 50.56 |
| CDX67785 | Canola | cytosol | 16.06 | 48.44 |
| CDX71909 | Canola | cytosol | 41.8 | 47.36 |
| CDX98357 | Canola | cytosol | 25.73 | 43.06 |
| CDX67781 | Canola | cytosol | 57.34 | 42.4 |
| CDX98352 | Canola | cytosol, nucleus, plasma membrane | 54.92 | 41.9 |
| CDY00593 | Canola | cytosol | 26.6 | 41.73 |
| CDX67788 | Canola | cytosol | 23.32 | 41.67 |
| CDY67935 | Canola | cytosol | 31.43 | 41.08 |
| CDY58541 | Canola | cytosol | 31.43 | 39.82 |
| CDY33289 | Canola | cytosol | 33.85 | 38.74 |
| CDY59410 | Canola | cytosol | 33.68 | 38.54 |
| CDY49258 | Canola | cytosol | 31.43 | 38.16 |
| CDY29185 | Canola | cytosol | 27.98 | 37.94 |
| CDX67768 | Canola | cytosol | 26.42 | 37.5 |
| CDX98338 | Canola | cytosol | 26.25 | 37.35 |
| CDY65604 | Canola | cytosol | 31.09 | 37.19 |
| CDX84742 | Canola | cytosol | 29.02 | 36.92 |
| CDX98339 | Canola | cytosol, extracellular | 25.91 | 36.59 |
| CDX98340 | Canola | cytosol | 13.82 | 36.53 |
| CDY65456 | Canola | peroxisome | 30.57 | 36.34 |
| CDX98342 | Canola | cytosol | 24.52 | 36.04 |
| CDX67770 | Canola | cytosol | 24.35 | 35.97 |
| CDX76838 | Canola | cytosol | 28.32 | 35.73 |
| CDY34798 | Canola | peroxisome | 28.15 | 35.51 |
| CDX67769 | Canola | cytosol | 25.56 | 35.49 |
| CDX98334 | Canola | golgi, mitochondrion, plasma membrane | 19.0 | 34.81 |
| CDX95484 | Canola | cytosol | 20.9 | 34.38 |
| CDY65605 | Canola | cytosol | 16.23 | 33.94 |
| CDY50412 | Canola | cytosol, nucleus, peroxisome | 25.73 | 33.63 |
| CDY29195 | Canola | cytosol | 30.22 | 32.47 |
| CDX89015 | Canola | cytosol | 26.42 | 32.28 |
| CDY18865 | Canola | plastid | 16.41 | 31.25 |
| CDY00610 | Canola | mitochondrion | 27.46 | 30.29 |
| CDY29197 | Canola | cytosol | 29.88 | 30.09 |
| CDY07824 | Canola | cytosol | 28.15 | 29.74 |
| CDY07822 | Canola | cytosol | 30.4 | 29.73 |
| CDY06019 | Canola | cytosol | 44.21 | 29.56 |
| CDY29196 | Canola | cytosol | 27.29 | 28.73 |
| CDY07837 | Canola | cytosol | 26.94 | 28.68 |
| CDX89484 | Canola | cytosol | 30.74 | 28.66 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 17.62 | 24.82 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EnsemblPlants:CDY06017 | ProteinID:CDY06017 | ProteinID:CDY06017.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:FBD | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00121863001 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_2 | PFAM:PF00646 | PFAM:PF07723 |
| PFscan:PS50181 | PANTHER:PTHR31639 | PANTHER:PTHR31639:SF6 | SMART:SM00579 | SUPFAM:SSF52047 | SUPFAM:SSF81383 |
| UniParc:UPI0004EE75EF | SEG:seg | : | : | : | : |
Description
BnaA09g37630D
Coordinates
chrLK031967:-:238009..241059
Molecular Weight (calculated)
65327.1 Da
IEP (calculated)
5.325
GRAVY (calculated)
-0.204
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPDQVFREC IMERQINETN KCWDGDGDRC ICNPWEGTPI WLSSSPVKKL KVLRFGEICS YFTNPTFHFQ GSSHHHHHHH PHVVSLVDLF VRKKKMEDMF
101: NRLPNPLISH ILSFLPTKEA ASTSVLSKRW RLLFASVTNL DFEGDEESPS FVEFVNRVLA LGGNDSINRF SLIFTDYPDP DTVTAWILNV LRRGVSELEL
201: SVSDYPLPLE IFVSKSLAKL KLGGGDGLSF SADVKKVSLP KLKTLEIESV VFEEDGVGFV KLLSGCPVLE ELVLVNIGWE HWKSCSVSAK SLRKLKFFCE
301: DNDENPKSVS FDTPNLEYLE YSDNIAKKYP KVKFRSLVEA HISLRLTEDQ SADAGSSEED EYLFESDDDE EKEMVGNATN FFKGICNVKI LYLSAKTLEV
401: LAFCCEATPV FNNLIQLTVE SDEEIGWDSL PGLLKNCPNL ETLVFKGLVH KSTKGCGNMC ACKPLKNPSC LSSSAVKVLK IILSTHIDDD GMEEEQIKHF
501: LEKMPRLEQL VVYFNESYEP SVFELSKKLQ SVSTIASPKC NLQVISQNLS LSSTLPCALT KKWSAPPNEE YTWFLKAVT
101: NRLPNPLISH ILSFLPTKEA ASTSVLSKRW RLLFASVTNL DFEGDEESPS FVEFVNRVLA LGGNDSINRF SLIFTDYPDP DTVTAWILNV LRRGVSELEL
201: SVSDYPLPLE IFVSKSLAKL KLGGGDGLSF SADVKKVSLP KLKTLEIESV VFEEDGVGFV KLLSGCPVLE ELVLVNIGWE HWKSCSVSAK SLRKLKFFCE
301: DNDENPKSVS FDTPNLEYLE YSDNIAKKYP KVKFRSLVEA HISLRLTEDQ SADAGSSEED EYLFESDDDE EKEMVGNATN FFKGICNVKI LYLSAKTLEV
401: LAFCCEATPV FNNLIQLTVE SDEEIGWDSL PGLLKNCPNL ETLVFKGLVH KSTKGCGNMC ACKPLKNPSC LSSSAVKVLK IILSTHIDDD GMEEEQIKHF
501: LEKMPRLEQL VVYFNESYEP SVFELSKKLQ SVSTIASPKC NLQVISQNLS LSSTLPCALT KKWSAPPNEE YTWFLKAVT
001: MDFVSRDRIS SLPNPVVSHI LSFLPTKEAA STSVLSKKWR YLFAYVTNLD FDDSDYQDGK PKSDVELSRS FMEFVDRVLA LQGNGSVNKF SLECSNYDVD
101: LARVTGWILN VLGRGVSELD LSILEYPLPS EIFVSKTLVR LKLGPANDLT LTLDRKDVFL PKLKTLYIDC VDVQERGFGF VKLLSGCPVL EELVLMNIGW
201: ENWKFCSVSV KTLKRLTFFC EETYENPKSV SFDTPNLVYL EYSDAIASKY PKVNFNSLVE AHIGLRLTED QSGDADFSEE DYFSEGDEKK QMVGNATDFL
301: KGISTVQILY LSAQAIEVLT FCCEPIPVFN NLIQLTIENN SEIRWDSLPG LLKNCPNLET LVLKRLLHKY NKACGNVCCC KRPKQPSCLS SSPVKVLKIF
401: LFDDNDEEDG SEMRQIKYFL EKMPRLEELV VYYNTAYDPA VLELSKKLQK IPKIASPKCK IQVISENLSL SSTVPSFLTT RWSSLPPEEA YPWVDSPPPQ
501: IIDPMLEYGS PPEDDDSWLY
101: LARVTGWILN VLGRGVSELD LSILEYPLPS EIFVSKTLVR LKLGPANDLT LTLDRKDVFL PKLKTLYIDC VDVQERGFGF VKLLSGCPVL EELVLMNIGW
201: ENWKFCSVSV KTLKRLTFFC EETYENPKSV SFDTPNLVYL EYSDAIASKY PKVNFNSLVE AHIGLRLTED QSGDADFSEE DYFSEGDEKK QMVGNATDFL
301: KGISTVQILY LSAQAIEVLT FCCEPIPVFN NLIQLTIENN SEIRWDSLPG LLKNCPNLET LVLKRLLHKY NKACGNVCCC KRPKQPSCLS SSPVKVLKIF
401: LFDDNDEEDG SEMRQIKYFL EKMPRLEELV VYYNTAYDPA VLELSKKLQK IPKIASPKCK IQVISENLSL SSTVPSFLTT RWSSLPPEEA YPWVDSPPPQ
501: IIDPMLEYGS PPEDDDSWLY
Arabidopsis Description
F-box/LRR-repeat protein At3g59200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.