Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67788 | Canola | cytosol | 85.84 | 91.67 |
| AT3G59270.1 | Thale cress | cytosol | 69.65 | 71.94 |
| CDX67785 | Canola | cytosol | 28.03 | 50.52 |
| CDX67782 | Canola | cytosol | 47.11 | 37.39 |
| CDX71909 | Canola | cytosol | 55.2 | 37.38 |
| CDX98353 | Canola | cytosol | 41.91 | 33.26 |
| CDX67783 | Canola | cytosol | 40.46 | 32.79 |
| CDX98355 | Canola | cytosol | 39.88 | 32.7 |
| CDX98354 | Canola | cytosol | 39.88 | 32.39 |
| CDY57500 | Canola | cytosol | 39.31 | 28.69 |
| CDX98340 | Canola | cytosol | 17.05 | 26.94 |
| CDY06017 | Canola | nucleus | 43.06 | 25.73 |
| CDY65605 | Canola | cytosol | 20.52 | 25.63 |
| CDX67768 | Canola | cytosol | 29.48 | 25.0 |
| CDX67770 | Canola | cytosol | 28.32 | 25.0 |
| CDX98342 | Canola | cytosol | 28.32 | 24.87 |
| CDX76838 | Canola | cytosol | 32.95 | 24.84 |
| CDY34798 | Canola | peroxisome | 32.37 | 24.4 |
| CDX98339 | Canola | cytosol, extracellular | 28.61 | 24.15 |
| CDY18865 | Canola | plastid | 21.1 | 24.01 |
| CDX67769 | Canola | cytosol | 28.9 | 23.98 |
| CDY29185 | Canola | cytosol | 29.19 | 23.65 |
| CDX98338 | Canola | cytosol | 27.75 | 23.59 |
| CDX98334 | Canola | golgi, mitochondrion, plasma membrane | 21.39 | 23.42 |
| CDY58541 | Canola | cytosol | 30.92 | 23.41 |
| CDY59410 | Canola | cytosol | 34.1 | 23.32 |
| CDY33289 | Canola | cytosol | 33.81 | 23.12 |
| CDY00593 | Canola | cytosol | 24.57 | 23.04 |
| CDY49258 | Canola | cytosol | 31.5 | 22.85 |
| CDX84742 | Canola | cytosol | 29.48 | 22.42 |
| CDY65604 | Canola | cytosol | 31.21 | 22.31 |
| CDY65456 | Canola | peroxisome | 30.92 | 21.97 |
| CDY06019 | Canola | cytosol | 54.91 | 21.94 |
| CDY50412 | Canola | cytosol, nucleus, peroxisome | 26.88 | 20.99 |
| CDX95484 | Canola | cytosol | 21.1 | 20.74 |
| CDY67935 | Canola | cytosol | 25.43 | 19.86 |
| CDY29195 | Canola | cytosol | 30.64 | 19.67 |
| CDX89015 | Canola | cytosol | 26.88 | 19.62 |
| CDY07824 | Canola | cytosol | 28.9 | 18.25 |
| CDY29197 | Canola | cytosol | 30.06 | 18.09 |
| CDX89484 | Canola | cytosol | 32.08 | 17.87 |
| CDY29196 | Canola | cytosol | 28.32 | 17.82 |
| CDY07822 | Canola | cytosol | 30.06 | 17.57 |
| CDY00610 | Canola | mitochondrion | 26.59 | 17.52 |
| CDX67781 | Canola | cytosol | 39.31 | 17.37 |
| CDX98352 | Canola | cytosol, nucleus, plasma membrane | 37.86 | 17.26 |
| CDX67786 | Canola | cytosol | 8.09 | 15.73 |
| CDY07837 | Canola | cytosol | 24.28 | 15.44 |
| GSMUA_Achr2P13780_001 | Banana | cytosol | 13.01 | 10.95 |
Protein Annotations
| EnsemblPlants:CDX98357 | EnsemblPlantsGene:GSBRNA2T00105911001 | InterPro:FBD | PANTHER:PTHR31639 | PANTHER:PTHR31639:SF6 | ProteinID:CDX98357 |
| ProteinID:CDX98357.1 | SMART:SM00579 | SUPFAM:SSF52047 | UniParc:UPI0004EF4AD4 | MapMan:35.1 | : |
Description
BnaC06g17180D
Coordinates
chrLK031904:-:786608..787918
Molecular Weight (calculated)
39880.1 Da
IEP (calculated)
5.080
GRAVY (calculated)
-0.273
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLDFDDSIS MHPGVRRQER DKIRRRFIRL VDSKLALHRN APLNRLSIKC KDDVGPAPVI RWISKVLNRH VTELVLNISS HWSWPLSSEV DSSETMCQEF
101: WESCSVSSIT LKRLTFRFKQ MVYDNPKSVS LDLRMTHEQI GQAKLSEDDI AKEKEGTMVG NATVLLMGIC NVKKLYLSDN TLEVLAFCCK PMPVYNNLVH
201: LTIKTHRDVE WESLTALLKN CQNLETLVFE GLLHRYGMNC RSCECLCKPW EEEDVPTCLS SSPVKVLEIL KFGDICEDED MDKMMEQVEY FLETMPNLEQ
301: LIIHYETSID EDVEEVLSQF QMVSREGLSK CKIQVISDNL NLSSST
101: WESCSVSSIT LKRLTFRFKQ MVYDNPKSVS LDLRMTHEQI GQAKLSEDDI AKEKEGTMVG NATVLLMGIC NVKKLYLSDN TLEVLAFCCK PMPVYNNLVH
201: LTIKTHRDVE WESLTALLKN CQNLETLVFE GLLHRYGMNC RSCECLCKPW EEEDVPTCLS SSPVKVLEIL KFGDICEDED MDKMMEQVEY FLETMPNLEQ
301: LIIHYETSID EDVEEVLSQF QMVSREGLSK CKIQVISDNL NLSSST
001: MNLDFDDSKR MHYGVTKQER VKMLQRFIKR VDGKLALCKN VPLNRFSIKC KDDVGPAPVI GWITNVLKRR VSELALDISS CWDWPMSTAI DGCNTMVQEF
101: WESCSVSSTS LKRLTYLKAN FDSLVEARLD LQMTHDQIHK AKFSADDPIQ HEGLVGNATV FFIGICNVRS LYLSYNTLEP LPVFNNLIQL TVKTDRLVGW
201: ESLTALLKNS PNLETLVFEG LLHRYDMKCQ SSDECLCKPW EEENIPTCLS LSPVKVLKIM KFGDIDEDED MDKMMDQVEY FLETMPNLEQ LIIHYETSID
301: EDVEEVLSQF QMVPREGLTE CRIQVISDNL VLSSI
101: WESCSVSSTS LKRLTYLKAN FDSLVEARLD LQMTHDQIHK AKFSADDPIQ HEGLVGNATV FFIGICNVRS LYLSYNTLEP LPVFNNLIQL TVKTDRLVGW
201: ESLTALLKNS PNLETLVFEG LLHRYDMKCQ SSDECLCKPW EEENIPTCLS LSPVKVLKIM KFGDIDEDED MDKMMDQVEY FLETMPNLEQ LIIHYETSID
301: EDVEEVLSQF QMVPREGLTE CRIQVISDNL VLSSI
Arabidopsis Description
FBD-like domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9LX44]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.