Factsheet for HORVU7Hr1G115870.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G022130.3
HORVU2Hr1G061320.3
HORVU2Hr1G072180.1
HORVU2Hr1G072210.1
HORVU3Hr1G061870.1
HORVU4Hr1G003360.1
HORVU4Hr1G003410.3
HORVU4Hr1G009730.1
HORVU5Hr1G092190.1
HORVU5Hr1G098570.6
HORVU7Hr1G082420.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62090.1	HORVU1Hr1G022130.3	AT2G47700.1	21798944
AT5G62090.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT5G62090.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT5G62090.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT5G62090.1	HORVU3Hr1G061870.1	AT3G58630.1	21798944
AT5G62090.1	HORVU2Hr1G061320.3	AT4G08150.1	21798944
AT5G62090.1	HORVU4Hr1G003360.1	AT4G08150.1	21798944
AT5G62090.1	HORVU4Hr1G003410.3	AT4G08150.1	21798944
AT5G62090.1	HORVU4Hr1G009730.1	AT4G08150.1	21798944
AT5G62090.1	HORVU5Hr1G098570.6	AT4G08150.1	21798944
AT5G62090.1	HORVU7Hr1G082420.2	AT5G53950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G520700.1	Wheat	nucleus	82.98	82.78
TraesCS7B01G437100.1	Wheat	plastid	82.98	82.78
TraesCS7D01G510400.2	Wheat	nucleus	82.98	76.87
Os06t0126000-02	Rice	cytosol, nucleus	65.34	63.99
HORVU7Hr1G010050.2	Barley	nucleus, plastid	68.82	63.31
HORVU7Hr1G029650.10	Barley	plastid	67.7	62.36
KXG34470	Sorghum	nucleus, plastid	54.78	59.76
KXG19170	Sorghum	plastid	56.52	58.26
Zm00001d045516_P006	Maize	nucleus, plastid	55.65	57.81
Zm00001d035990_P002	Maize	plastid	55.65	57.44
Zm00001d018890_P006	Maize	nucleus, plastid	50.19	53.65
GSMUA_Achr7P05870_001	Banana	nucleus	16.27	45.8
KRG88471	Soybean	nucleus, plastid	23.73	44.63
Solyc03g026190.2.1	Tomato	plastid	31.06	44.33
KRH38603	Soybean	plastid	27.95	42.37
GSMUA_Achr1P16220_001	Banana	nucleus	35.65	41.06
GSMUA_Achr1P07930_001	Banana	nucleus	37.02	37.53
CDX89417	Canola	nucleus	17.64	36.88
CDY57709	Canola	nucleus, plastid	22.36	36.59
KRH38604	Soybean	nucleus	36.65	36.51
GSMUA_Achr10P...	Banana	nucleus	35.03	36.39
CDX92713	Canola	nucleus, plastid	30.06	35.23
AT4G25515.1	Thale cress	nucleus, plastid	29.81	35.04
CDY30691	Canola	nucleus	32.92	34.96
CDY52362	Canola	nucleus	29.81	34.88
KRH09131	Soybean	nucleus, plastid	37.64	34.87
VIT_16s0100g00500.t01	Wine grape	plastid	37.39	34.84
CDY54085	Canola	nucleus, plastid	30.43	34.75
CDY50201	Canola	nucleus, plastid	28.94	34.16
Bra019159.1-P	Field mustard	nucleus, plastid	28.94	34.16
VIT_02s0025g04390.t01	Wine grape	vacuole	28.82	33.77
KRH09132	Soybean	plastid	36.77	33.67
Bra013897.1-P	Field mustard	nucleus	16.52	33.33
AT5G62090.1	Thale cress	nucleus	33.79	33.33
AT4G25520.1	Thale cress	plastid	30.56	32.89
PGSC0003DMT400037024	Potato	plastid	37.27	32.75
GSMUA_Achr2P03310_001	Banana	nucleus	32.42	32.34
Bra010458.1-P	Field mustard	nucleus, plastid	23.48	31.34
CDX92714	Canola	cytosol	20.5	31.02
Bra029289.1-P	Field mustard	nucleus	25.22	30.71
HORVU4Hr1G017160.3	Barley	nucleus, plastid	23.73	20.72
HORVU4Hr1G017140.2	Barley	plastid	23.73	20.36

Protein Annotations

EnsemblPlants:HORVU7Hr1G115870.4	EnsemblPlantsGene:HORVU7Hr1G115870	InterPro:LIM-bd/SEUSS	ncoils:Coil	PANTHER:PTHR10378	PANTHER:PTHR10378:SF12
PFAM:PF01803	SEG:seg	UniParc:UPI000B470CE3	UniProt:A0A287XX05	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:+:642422872..642430476

Molecular Weight (calculated)

83008.9 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.558

Length

805 amino acids

Sequence
(BLAST)

001: MSVAPHFNLG LVPRDMNGSI PVSSANSSGP SIGVSSLVTD GNSSLSGGAQ FQHSTSMNAD SFMRLPSSPM SFSSNNISGS SVIDGSTMQQ SPPQEQMQKR
101: RSSSATSQPG IEADGAFHGQ KKPRVDIRQD DILQQHLIQQ LLQGQSSLHF QGQHNPQLQA LIRQQKLAHI QHLQQHQLSQ QFPQIQQSQI GIPRQPQLRP
201: PLAQPGMQLP GPVRTPVESG LCSRRLMQYL YHKRQRPENN PITYWRKLID EYFAPQARER WCVSSYEKRG NSPVVIPQTA RDTWRCDICN THTGKGYEAT
301: HEILPRLCQI RFDHGVVDEY LFLDVPNEFR LPNGLLLLEH TKVVQKSIYD HLHVTHEGQL RIIFTPELKI MSWEFCSRRH DEYITRRFLA PQVNHLLQIA
401: QKYQAATNES GPAGVSANDA EAICNLFVSA SEQLAKNLDR HSLNEHGLSK RYVRCLQISE VVNNMKDLIE FSHKNKLGPI ESLKNYPRQM GPKLTMQNMH
501: EAKGTSMEMS THGNNNEAPG ASTICSSPQN AAAQNNYQNM LRSSSANQGL LQXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
601: XXXXXQQEAS SMFKGSTGMH NGVQLDVSRS FRAGQLGQFQ QHPMSFQQAM PQHQQNSFGA GVSTQYQQHL IQQLLQEAKS SNNRIMVQQQ QQPTSAGAVI
701: TNSPASGEAH DMNSGAAKGA PPASTTGPSN LINSAAGMVQ RCSSFKSVSS NPAAAVATSG GNPVSPKAES MHEVPELDHL ISSELAESGL FLEEQQGGGA
801: YSWNM

Best Arabidopsis Sequence Match ( AT5G62090.3 )
(BLAST)

001: MASSTSGIFF QGDDESQSFI NSHLTSSYGN SSNSAPGCGG PTGGYHNLSM VSGDMHNPVM MSVSTPGPSA GASSLVTDAN SGLSGGGPHL QRSASINNES
101: YMRLPASPMS FSSNNISISG SSVVDGSTVV QRHDPSVQLG GSSATSLPTS QTNQIPLSMA RRASESFFQD PNNLTQARKK PRLDSKQDDA LQQQILRQWL
201: QRQDILQQQQ QQQQQGQNPQ FQILLQQQKL RQQQQYLQSL PPLQRVQLQQ QQQVQQQQQL QQQHQQQQQQ LQQQGMQMQL TGGPRPYENS VCARRLMQYL
301: YHQRQRPSES SIVYWRKFVT EYFSPRAKKR WCLSHYDNVG HSALGVSPQA ATDEWQCDLC GSKSGRGFEA TFDVLPRLNE IKFASGVLDE LLYLGVPSER
401: RYGSGIMVLE YGKAVQESVY EHIRVVREGH LRIIFSQELK ILSWEFCTRR HEELLPRRLV APQVNQLLQV AEKCQSTIDQ SGSDGIHQQD LQANSNMVMA
501: AGRQLAKSLE SHSLNDLGFS KRYVRCLQIS EVVSSMKDMI DFCRDQKVGP IEALKSYPYR MKAGKPQMQE MEQLAAARGL PPDRNSLNKL MALRNSGINI
601: PMNNMSGQGS LPGSAQAAAF ALTNYQSMLM KQNHLNSDLN NTTIQQEPSR NRSASPSYQG TSPLLPGFVH SPSISGVSSH LSPQRQMPSS SYNGSTQQYH
701: QQPPSCSSGN QTLEQQMIHQ IWQQMANSNG GSGQQQQSLS GQNMMNCNTN MGRNRTDYVP AAAETPSTSN RFRGIKGLDQ SQNLEGIISN TSLNFGNNGV
801: FSNEVDESMG GYSWKS

Arabidopsis Description

SLK2Probable transcriptional regulator SLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BP0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.