Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G437100.1 | Wheat | plastid | 95.91 | 95.91 |
| TraesCS7D01G510400.2 | Wheat | nucleus | 96.9 | 89.99 |
| HORVU7Hr1G115870.4 | Barley | plastid | 82.78 | 82.98 |
| TraesCS7A01G144600.3 | Wheat | nucleus, plastid | 75.34 | 71.11 |
| TraesCS4A01G441500.1 | Wheat | nucleus, plastid | 75.09 | 70.22 |
| TraesCS7A01G054900.2 | Wheat | nucleus, plastid | 75.59 | 69.56 |
| Os06t0126000-02 | Rice | cytosol, nucleus | 67.91 | 66.67 |
| KXG34470 | Sorghum | nucleus, plastid | 57.5 | 62.87 |
| KXG19170 | Sorghum | plastid | 59.98 | 61.97 |
| Zm00001d035990_P002 | Maize | plastid | 58.24 | 60.26 |
| Zm00001d045516_P006 | Maize | nucleus, plastid | 57.5 | 59.87 |
| Zm00001d018890_P006 | Maize | nucleus, plastid | 52.79 | 56.57 |
| GSMUA_Achr7P05870_001 | Banana | nucleus | 15.99 | 45.1 |
| KRG88471 | Soybean | nucleus, plastid | 23.79 | 44.86 |
| Solyc03g026190.2.1 | Tomato | plastid | 30.98 | 44.33 |
| GSMUA_Achr1P16220_001 | Banana | nucleus | 37.05 | 42.78 |
| KRH38603 | Soybean | plastid | 27.88 | 42.37 |
| GSMUA_Achr1P07930_001 | Banana | nucleus | 38.04 | 38.66 |
| KRH38604 | Soybean | nucleus | 38.17 | 38.12 |
| GSMUA_Achr10P... | Banana | nucleus | 35.94 | 37.42 |
| CDX89417 | Canola | nucleus | 17.84 | 37.4 |
| AT4G25515.1 | Thale cress | nucleus, plastid | 31.72 | 37.37 |
| CDY52362 | Canola | nucleus | 31.85 | 37.35 |
| CDX92713 | Canola | nucleus, plastid | 31.72 | 37.26 |
| CDY57709 | Canola | nucleus, plastid | 22.68 | 37.2 |
| CDY54085 | Canola | nucleus, plastid | 32.47 | 37.16 |
| VIT_16s0100g00500.t01 | Wine grape | plastid | 39.16 | 36.57 |
| CDY50201 | Canola | nucleus, plastid | 30.48 | 36.07 |
| Bra019159.1-P | Field mustard | nucleus, plastid | 30.48 | 36.07 |
| CDY30691 | Canola | nucleus | 33.83 | 36.02 |
| KRH09131 | Soybean | nucleus, plastid | 38.66 | 35.9 |
| AT4G25520.1 | Thale cress | plastid | 32.59 | 35.16 |
| KRH09132 | Soybean | plastid | 38.17 | 35.04 |
| Bra010458.1-P | Field mustard | nucleus, plastid | 26.02 | 34.83 |
| AT5G62090.1 | Thale cress | nucleus | 34.82 | 34.44 |
| VIT_02s0025g04390.t01 | Wine grape | vacuole | 28.75 | 33.77 |
| PGSC0003DMT400037024 | Potato | plastid | 38.17 | 33.62 |
| Bra013897.1-P | Field mustard | nucleus | 16.6 | 33.58 |
| GSMUA_Achr2P03310_001 | Banana | nucleus | 33.58 | 33.58 |
| CDX92714 | Canola | cytosol | 22.06 | 33.46 |
| Bra029289.1-P | Field mustard | nucleus | 26.39 | 32.22 |
| TraesCS4A01G211800.1 | Wheat | nucleus, plastid | 24.54 | 21.76 |
| TraesCS4A01G211700.2 | Wheat | nucleus, plastid | 25.03 | 21.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G520700.1 | EnsemblPlantsGene:TraesCS7A01G520700 | InterPro:LIM-bd/SEUSS | ncoils:Coil | PANTHER:PTHR10378 | PANTHER:PTHR10378:SF12 |
| PFAM:PF01803 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:704890971..704904162
Molecular Weight (calculated)
88947.6 Da
IEP (calculated)
8.416
GRAVY (calculated)
-0.635
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVAPHFNLG LVPRDMNGGI PVSSANSSGP SIGVSSLVTD GNSSLSGGAQ FQHSTSMNAD SFMRLPSSPM SFSSNNISGS SVIDGSTMQQ SPPQEQMQKR
101: RSSSATSQPG IEADGAFHGQ KKPRVDIRQD DILQQHLIQQ LLQGQSSLHF QGQHNPQLQA LIRQQKLAHI QHLQQHQLSQ QFPQIQQSQV GIPRQPQLRP
201: PLAQPGMQLP GPVRTPVESG LCSRRLMQYL YHKRQHPENN PITYWRKLID EYFAPRARER WCVSSYEKRG NSPIAIPTAQ DTWRCDICNT HTGKGYEATY
301: EILPRLCQIR FDHGVVDEYL FLDVPNEFRL PNGLLLLEHT KVVQKSIYDH LHVTHEGQLR IIFTPELKIM SWEFCSRRHD EYITRRFLAP QVNHLLQIAQ
401: KYQAAANESG PAGVSTNDAQ AICNMFASAS QQLAKNLDHH SLNEHGLSKR YVRCLQISEV VNNMKDLIDF SHKNKLGPIE SLKNYPRQNG PKLTMQNMLE
501: AKGANTEIST HGNSEAPGVR TVCSSPQNAV AQNNYQNMLR SSSANQGLLQ QEASQNAAAL NNYQNMLRSS SANQLQQEAS QNAAALNNYQ NMLRSSSANQ
601: SLLQHEASSM FKGPTGMHNG VQLEVSRSFR AGQLGQFQQH PMSFQQAMPQ HQQNSFGAGA STQYQQHLMQ QLLQEAKSSI SRVMAQQQQQ QQPPSVSGPV
701: NTNKPASGDQ AHQMNNGAMK GAAQTGTTGP SNLINSGAGI VQRCSSFKSV SSNPAAGVAA SGNTASPKVA ESMHEEDELD HLISSELAES GLFMGEQQGG
801: GAYSWDM
101: RSSSATSQPG IEADGAFHGQ KKPRVDIRQD DILQQHLIQQ LLQGQSSLHF QGQHNPQLQA LIRQQKLAHI QHLQQHQLSQ QFPQIQQSQV GIPRQPQLRP
201: PLAQPGMQLP GPVRTPVESG LCSRRLMQYL YHKRQHPENN PITYWRKLID EYFAPRARER WCVSSYEKRG NSPIAIPTAQ DTWRCDICNT HTGKGYEATY
301: EILPRLCQIR FDHGVVDEYL FLDVPNEFRL PNGLLLLEHT KVVQKSIYDH LHVTHEGQLR IIFTPELKIM SWEFCSRRHD EYITRRFLAP QVNHLLQIAQ
401: KYQAAANESG PAGVSTNDAQ AICNMFASAS QQLAKNLDHH SLNEHGLSKR YVRCLQISEV VNNMKDLIDF SHKNKLGPIE SLKNYPRQNG PKLTMQNMLE
501: AKGANTEIST HGNSEAPGVR TVCSSPQNAV AQNNYQNMLR SSSANQGLLQ QEASQNAAAL NNYQNMLRSS SANQLQQEAS QNAAALNNYQ NMLRSSSANQ
601: SLLQHEASSM FKGPTGMHNG VQLEVSRSFR AGQLGQFQQH PMSFQQAMPQ HQQNSFGAGA STQYQQHLMQ QLLQEAKSSI SRVMAQQQQQ QQPPSVSGPV
701: NTNKPASGDQ AHQMNNGAMK GAAQTGTTGP SNLINSGAGI VQRCSSFKSV SSNPAAGVAA SGNTASPKVA ESMHEEDELD HLISSELAES GLFMGEQQGG
801: GAYSWDM
001: MASSTSGIFF QGDDESQSFI NSHLTSSYGN SSNSAPGCGG PTGGYHNLSM VSGDMHNPVM MSVSTPGPSA GASSLVTDAN SGLSGGGPHL QRSASINNES
101: YMRLPASPMS FSSNNISISG SSVVDGSTVV QRHDPSVQLG GSSATSLPTS QTNQIPLSMA RRASESFFQD PNNLTQARKK PRLDSKQDDA LQQQILRQWL
201: QRQDILQQQQ QQQQQGQNPQ FQILLQQQKL RQQQQYLQSL PPLQRVQLQQ QQQVQQQQQL QQQHQQQQQQ LQQQGMQMQL TGGPRPYENS VCARRLMQYL
301: YHQRQRPSES SIVYWRKFVT EYFSPRAKKR WCLSHYDNVG HSALGVSPQA ATDEWQCDLC GSKSGRGFEA TFDVLPRLNE IKFASGVLDE LLYLGVPSER
401: RYGSGIMVLE YGKAVQESVY EHIRVVREGH LRIIFSQELK ILSWEFCTRR HEELLPRRLV APQVNQLLQV AEKCQSTIDQ SGSDGIHQQD LQANSNMVMA
501: AGRQLAKSLE SHSLNDLGFS KRYVRCLQIS EVVSSMKDMI DFCRDQKVGP IEALKSYPYR MKAGKPQMQE MEQLAAARGL PPDRNSLNKL MALRNSGINI
601: PMNNMSGQGS LPGSAQAAAF ALTNYQSMLM KQNHLNSDLN NTTIQQEPSR NRSASPSYQG TSPLLPGFVH SPSISGVSSH LSPQRQMPSS SYNGSTQQYH
701: QQPPSCSSGN QTLEQQMIHQ IWQQMANSNG GSGQQQQSLS GQNMMNCNTN MGRNRTDYVP AAAETPSTSN RFRGIKGLDQ SQNLEGIISN TSLNFGNNGV
801: FSNEVDESMG GYSWKS
101: YMRLPASPMS FSSNNISISG SSVVDGSTVV QRHDPSVQLG GSSATSLPTS QTNQIPLSMA RRASESFFQD PNNLTQARKK PRLDSKQDDA LQQQILRQWL
201: QRQDILQQQQ QQQQQGQNPQ FQILLQQQKL RQQQQYLQSL PPLQRVQLQQ QQQVQQQQQL QQQHQQQQQQ LQQQGMQMQL TGGPRPYENS VCARRLMQYL
301: YHQRQRPSES SIVYWRKFVT EYFSPRAKKR WCLSHYDNVG HSALGVSPQA ATDEWQCDLC GSKSGRGFEA TFDVLPRLNE IKFASGVLDE LLYLGVPSER
401: RYGSGIMVLE YGKAVQESVY EHIRVVREGH LRIIFSQELK ILSWEFCTRR HEELLPRRLV APQVNQLLQV AEKCQSTIDQ SGSDGIHQQD LQANSNMVMA
501: AGRQLAKSLE SHSLNDLGFS KRYVRCLQIS EVVSSMKDMI DFCRDQKVGP IEALKSYPYR MKAGKPQMQE MEQLAAARGL PPDRNSLNKL MALRNSGINI
601: PMNNMSGQGS LPGSAQAAAF ALTNYQSMLM KQNHLNSDLN NTTIQQEPSR NRSASPSYQG TSPLLPGFVH SPSISGVSSH LSPQRQMPSS SYNGSTQQYH
701: QQPPSCSSGN QTLEQQMIHQ IWQQMANSNG GSGQQQQSLS GQNMMNCNTN MGRNRTDYVP AAAETPSTSN RFRGIKGLDQ SQNLEGIISN TSLNFGNNGV
801: FSNEVDESMG GYSWKS
Arabidopsis Description
SLK2Probable transcriptional regulator SLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.