Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029289.1-P | Field mustard | nucleus | 72.96 | 83.66 |
| AT5G62090.1 | Thale cress | nucleus | 64.64 | 60.05 |
| KRG88471 | Soybean | nucleus, plastid | 32.98 | 58.41 |
| Solyc03g026190.2.1 | Tomato | plastid | 43.14 | 57.98 |
| KRH38603 | Soybean | plastid | 36.28 | 51.79 |
| VIT_16s0100g00500.t01 | Wine grape | plastid | 52.9 | 46.41 |
| KRH38604 | Soybean | nucleus | 48.55 | 45.54 |
| KRH09131 | Soybean | nucleus, plastid | 52.11 | 45.45 |
| CDX92713 | Canola | nucleus, plastid | 40.63 | 44.83 |
| CDY50201 | Canola | nucleus, plastid | 40.11 | 44.57 |
| CDY57709 | Canola | nucleus, plastid | 28.63 | 44.11 |
| CDY54085 | Canola | nucleus, plastid | 40.9 | 43.97 |
| CDY52362 | Canola | nucleus | 39.84 | 43.9 |
| KRH09132 | Soybean | plastid | 50.53 | 43.57 |
| PGSC0003DMT400037024 | Potato | plastid | 52.11 | 43.12 |
| CDX92714 | Canola | cytosol | 29.42 | 41.92 |
| CDX89417 | Canola | nucleus | 21.11 | 41.56 |
| GSMUA_Achr1P16220_001 | Banana | nucleus | 37.6 | 40.77 |
| GSMUA_Achr7P05870_001 | Banana | nucleus | 15.3 | 40.56 |
| CDY67669 | Canola | mitochondrion, nucleus | 12.14 | 38.66 |
| GSMUA_Achr10P... | Banana | nucleus | 39.31 | 38.45 |
| GSMUA_Achr1P07930_001 | Banana | nucleus | 38.26 | 36.52 |
| KXG34470 | Sorghum | nucleus, plastid | 34.43 | 35.37 |
| Zm00001d045516_P006 | Maize | nucleus, plastid | 36.02 | 35.23 |
| KXG19170 | Sorghum | plastid | 36.02 | 34.96 |
| Os06t0126000-02 | Rice | cytosol, nucleus | 37.2 | 34.31 |
| Zm00001d035990_P002 | Maize | plastid | 35.09 | 34.1 |
| TraesCS7A01G520700.1 | Wheat | nucleus | 36.02 | 33.83 |
| TraesCS7B01G437100.1 | Wheat | plastid | 35.49 | 33.33 |
| Zm00001d018890_P006 | Maize | nucleus, plastid | 32.98 | 33.2 |
| HORVU7Hr1G115870.4 | Barley | plastid | 34.96 | 32.92 |
| GSMUA_Achr2P03310_001 | Banana | nucleus | 34.43 | 32.34 |
| TraesCS7D01G510400.2 | Wheat | nucleus | 35.88 | 31.3 |
| TraesCS7D01G146100.2 | Wheat | nucleus, plastid | 33.91 | 30.52 |
| TraesCS7B01G047100.4 | Wheat | plastid | 33.64 | 29.96 |
| HORVU7Hr1G010050.2 | Barley | nucleus, plastid | 34.56 | 29.94 |
| TraesCS7A01G144600.3 | Wheat | nucleus, plastid | 33.77 | 29.94 |
| TraesCS7D01G050000.5 | Wheat | nucleus, plastid | 33.77 | 29.87 |
| TraesCS4A01G441500.1 | Wheat | nucleus, plastid | 33.64 | 29.55 |
| TraesCS7A01G054900.2 | Wheat | nucleus, plastid | 33.64 | 29.08 |
| HORVU7Hr1G029650.10 | Barley | plastid | 33.51 | 29.06 |
| CDY14963 | Canola | nucleus, plastid | 27.44 | 28.18 |
| CDY40943 | Canola | nucleus, plastid | 27.97 | 27.39 |
| CDY70167 | Canola | cytosol, mitochondrion, nucleus | 7.39 | 19.72 |
| CDY69476 | Canola | nucleus | 4.62 | 12.82 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A078GYW3 | EnsemblPlants:CDY30691 | ProteinID:CDY30691 | ProteinID:CDY30691.1 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 | GO:GO:0010044 | GO:GO:0047484 | GO:GO:0048467 |
| GO:GO:0048481 | GO:GO:1901001 | EnsemblPlantsGene:GSBRNA2T00046023001 | InterPro:LIM-bd/SEUSS | PFAM:PF01803 | PANTHER:PTHR10378 |
| PANTHER:PTHR10378:SF12 | UniParc:UPI0004EE734E | SEG:seg | : | : | : |
Description
BnaA02g33130DProbable transcriptional regulator SLK2 [Source:Projected from Arabidopsis thaliana (AT5G62090) UniProtKB/Swiss-Prot;Acc:Q94BP0]
Coordinates
chrLK032258:-:47371..51046
Molecular Weight (calculated)
83956.2 Da
IEP (calculated)
8.630
GRAVY (calculated)
-0.807
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGLTPSS SASGIFFQGG GDDESQGGGG GGFMNSHFTS SYGNSSNPGC GGGPGYHNPA MMSVSTPGAS SMLTDANSGG GGGISGGGPH LQRSASINNE
101: SYMRLPASPL SFSSSSVADG STVVQRPPPP HHDPRGGSSA TSIPTSRRAS ETFFQDPGQA RKKPRVDSKQ DDALQQQILR QWLQRQELLH QQQQGQNPQL
201: QLLLQQQKMR QQQQYLQSLP PLQRIQLQQQ QQVQQQQQQL QQQQMQQQQG APRGYENSVC ARRLMQYLYH QRQRPSEGSI GYWRKFVNEY FSPRAKKRWC
301: LSHYDNVGHN TLGVSPQAAT DEWQCDLCGS KSGRGFEATF DVLPRLNEIK FASGVIDELL YLSVPSERRF PSGIMVLEYA KAVQESVYEH IRVVREGHLR
401: IIFSQELKIL SWEFCTRRHE ELLPRRLVAP QVNQLLQVAE KCQSTIDQSG PDGIHQQDLQ ANSNMVMAAG RQLAKSLESH SLNDLGFSKR YVRCLQISEV
501: VSSMKDMIDF CRDQKVGPIE ALKSYPYRMR TGKMQMQEME QVANAAQGLP PDRNSLNKLM ALRNNNNMNG QGSAQAAAFA LTNYQTMLMK QNQEQTNGTL
601: QQDSSRNMSP SPSYQGAGSL LGGVSSHMSP QRQMPSSSYN SSPHQQYQQQ QPSCSGSNQA LEQQIHQIWQ QMANSNGGSG QQQQQQQSLS GQNMGRNRTD
701: YVPTAETPST SNRFRGMKGL DHGQNQEDMV SSNASLSFEN NGFFGSEVDE SMGYPWKA
101: SYMRLPASPL SFSSSSVADG STVVQRPPPP HHDPRGGSSA TSIPTSRRAS ETFFQDPGQA RKKPRVDSKQ DDALQQQILR QWLQRQELLH QQQQGQNPQL
201: QLLLQQQKMR QQQQYLQSLP PLQRIQLQQQ QQVQQQQQQL QQQQMQQQQG APRGYENSVC ARRLMQYLYH QRQRPSEGSI GYWRKFVNEY FSPRAKKRWC
301: LSHYDNVGHN TLGVSPQAAT DEWQCDLCGS KSGRGFEATF DVLPRLNEIK FASGVIDELL YLSVPSERRF PSGIMVLEYA KAVQESVYEH IRVVREGHLR
401: IIFSQELKIL SWEFCTRRHE ELLPRRLVAP QVNQLLQVAE KCQSTIDQSG PDGIHQQDLQ ANSNMVMAAG RQLAKSLESH SLNDLGFSKR YVRCLQISEV
501: VSSMKDMIDF CRDQKVGPIE ALKSYPYRMR TGKMQMQEME QVANAAQGLP PDRNSLNKLM ALRNNNNMNG QGSAQAAAFA LTNYQTMLMK QNQEQTNGTL
601: QQDSSRNMSP SPSYQGAGSL LGGVSSHMSP QRQMPSSSYN SSPHQQYQQQ QPSCSGSNQA LEQQIHQIWQ QMANSNGGSG QQQQQQQSLS GQNMGRNRTD
701: YVPTAETPST SNRFRGMKGL DHGQNQEDMV SSNASLSFEN NGFFGSEVDE SMGYPWKA
001: MASSTSGIFF QGDDESQSFI NSHLTSSYGN SSNSAPGCGG PTGGYHNLSM VSGDMHNPVM MSVSTPGPSA GASSLVTDAN SGLSGGGPHL QRSASINNES
101: YMRLPASPMS FSSNNISISG SSVVDGSTVV QRHDPSVQLG GSSATSLPTS QTNQIPLSMA RRASESFFQD PNNLTQARKK PRLDSKQDDA LQQQILRQWL
201: QRQDILQQQQ QQQQQGQNPQ FQILLQQQKL RQQQQYLQSL PPLQRVQLQQ QQQVQQQQQL QQQHQQQQQQ LQQQGMQMQL TGGPRPYENS VCARRLMQYL
301: YHQRQRPSES SIVYWRKFVT EYFSPRAKKR WCLSHYDNVG HSALGVSPQA ATDEWQCDLC GSKSGRGFEA TFDVLPRLNE IKFASGVLDE LLYLGVPSER
401: RYGSGIMVLE YGKAVQESVY EHIRVVREGH LRIIFSQELK ILSWEFCTRR HEELLPRRLV APQVNQLLQV AEKCQSTIDQ SGSDGIHQQD LQANSNMVMA
501: AGRQLAKSLE SHSLNDLGFS KRYVRCLQIS EVVSSMKDMI DFCRDQKVGP IEALKSYPYR MKAGKPQMQE MEQLAAARGL PPDRNSLNKL MALRNSGINI
601: PMNNMSGQGS LPGSAQAAAF ALTNYQSMLM KQNHLNSDLN NTTIQQEPSR NRSASPSYQG TSPLLPGFVH SPSISGVSSH LSPQRQMPSS SYNGSTQQYH
701: QQPPSCSSGN QTLEQQMIHQ IWQQMANSNG GSGQQQQSLS GQNMMNCNTN MGRNRTDYVP AAAETPSTSN RFRGIKGLDQ SQNLEGIISN TSLNFGNNGV
801: FSNEVDESMG GYSWKS
101: YMRLPASPMS FSSNNISISG SSVVDGSTVV QRHDPSVQLG GSSATSLPTS QTNQIPLSMA RRASESFFQD PNNLTQARKK PRLDSKQDDA LQQQILRQWL
201: QRQDILQQQQ QQQQQGQNPQ FQILLQQQKL RQQQQYLQSL PPLQRVQLQQ QQQVQQQQQL QQQHQQQQQQ LQQQGMQMQL TGGPRPYENS VCARRLMQYL
301: YHQRQRPSES SIVYWRKFVT EYFSPRAKKR WCLSHYDNVG HSALGVSPQA ATDEWQCDLC GSKSGRGFEA TFDVLPRLNE IKFASGVLDE LLYLGVPSER
401: RYGSGIMVLE YGKAVQESVY EHIRVVREGH LRIIFSQELK ILSWEFCTRR HEELLPRRLV APQVNQLLQV AEKCQSTIDQ SGSDGIHQQD LQANSNMVMA
501: AGRQLAKSLE SHSLNDLGFS KRYVRCLQIS EVVSSMKDMI DFCRDQKVGP IEALKSYPYR MKAGKPQMQE MEQLAAARGL PPDRNSLNKL MALRNSGINI
601: PMNNMSGQGS LPGSAQAAAF ALTNYQSMLM KQNHLNSDLN NTTIQQEPSR NRSASPSYQG TSPLLPGFVH SPSISGVSSH LSPQRQMPSS SYNGSTQQYH
701: QQPPSCSSGN QTLEQQMIHQ IWQQMANSNG GSGQQQQSLS GQNMMNCNTN MGRNRTDYVP AAAETPSTSN RFRGIKGLDQ SQNLEGIISN TSLNFGNNGV
801: FSNEVDESMG GYSWKS
Arabidopsis Description
SLK2Probable transcriptional regulator SLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.