Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53867 | Canola | cytosol | 98.4 | 29.15 |
| CDX72939 | Canola | mitochondrion, nucleus | 76.0 | 20.39 |
| CDY37498 | Canola | cytosol, mitochondrion | 10.4 | 14.13 |
| CDY26130 | Canola | cytosol | 10.4 | 12.87 |
| CDY68148 | Canola | nucleus | 76.0 | 12.86 |
| CDY56825 | Canola | cytosol | 8.8 | 4.82 |
| CDY22577 | Canola | cytosol | 5.6 | 4.7 |
| CDY32586 | Canola | cytosol | 13.6 | 4.5 |
| CDY51111 | Canola | cytosol | 8.0 | 4.02 |
| CDY10607 | Canola | cytosol | 12.8 | 3.89 |
| CDY02469 | Canola | cytosol | 12.8 | 3.88 |
| CDY08220 | Canola | cytosol | 12.8 | 3.88 |
| CDY24057 | Canola | cytosol | 12.8 | 3.88 |
| CDY33073 | Canola | cytosol | 12.8 | 3.88 |
| CDY39079 | Canola | cytosol | 12.8 | 3.88 |
| KRH61534 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 12.8 | 3.87 |
| KRH52210 | Soybean | cytosol, endoplasmic reticulum | 12.8 | 3.87 |
| CDY49861 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 12.8 | 3.75 |
| Solyc07g040750.1.1 | Tomato | cytosol | 12.0 | 3.63 |
| CDY55205 | Canola | cytosol | 12.0 | 3.55 |
| CDX97528 | Canola | cytosol | 12.0 | 3.53 |
| CDX75739 | Canola | cytosol | 11.2 | 3.21 |
| TraesCS6B01G217800.1 | Wheat | cytosol | 10.4 | 3.09 |
| CDY03623 | Canola | cytosol | 9.6 | 2.97 |
| CDY58940 | Canola | cytosol | 9.6 | 2.97 |
| CDX82280 | Canola | cytosol | 9.6 | 2.94 |
| CDY22956 | Canola | cytosol | 9.6 | 2.94 |
| CDY24617 | Canola | cytosol | 9.6 | 2.94 |
| CDY42205 | Canola | cytosol | 9.6 | 2.94 |
| CDY51692 | Canola | cytosol | 9.6 | 2.94 |
| CDY33416 | Canola | cytosol | 9.6 | 2.94 |
| CDY45702 | Canola | cytosol | 4.8 | 2.91 |
| CDX82505 | Canola | cytosol | 9.6 | 2.8 |
| CDY71952 | Canola | cytosol | 8.8 | 2.64 |
| TraesCS6A01G186600.1 | Wheat | cytosol | 11.2 | 2.55 |
| CDY51112 | Canola | cytosol | 8.8 | 2.5 |
| CDX85725 | Canola | cytosol | 8.8 | 2.49 |
| CDX70383 | Canola | cytosol | 8.8 | 2.46 |
| HORVU7Hr1G073770.1 | Barley | cytosol, nucleus | 12.0 | 2.34 |
| CDX69778 | Canola | cytosol | 8.8 | 2.22 |
| CDX78412 | Canola | cytosol | 8.8 | 2.21 |
| CDX67556 | Canola | cytosol | 8.0 | 2.12 |
| CDX69777 | Canola | cytosol, nucleus, plasma membrane | 8.8 | 2.1 |
| CDX85726 | Canola | cytosol | 8.0 | 2.04 |
| CDY13319 | Canola | cytosol | 8.0 | 2.04 |
| CDY23782 | Canola | endoplasmic reticulum, extracellular, vacuole | 4.8 | 2.01 |
| CDY54061 | Canola | cytosol | 4.8 | 1.84 |
| CDX95397 | Canola | cytosol | 7.2 | 1.82 |
| CDX76225 | Canola | cytosol | 7.2 | 1.81 |
| GSMUA_Achr9P13950_001 | Banana | mitochondrion | 4.0 | 1.63 |
| CDY51147 | Canola | cytosol | 6.4 | 1.61 |
| CDX91901 | Canola | cytosol | 6.4 | 1.6 |
| CDX74342 | Canola | cytosol | 6.4 | 1.56 |
| CDY11154 | Canola | cytosol | 2.4 | 1.49 |
| CDY48935 | Canola | cytosol, plastid | 5.6 | 1.47 |
| CDY47205 | Canola | plastid | 5.6 | 1.46 |
| CDY02574 | Canola | plastid | 5.6 | 1.46 |
| CDX71756 | Canola | cytosol | 5.6 | 1.46 |
| CDY58787 | Canola | cytosol | 5.6 | 1.45 |
| CDY07205 | Canola | cytosol | 5.6 | 1.43 |
| CDY27357 | Canola | cytosol, plastid | 5.6 | 1.38 |
| CDY37067 | Canola | cytosol | 5.6 | 1.37 |
| Os02t0221300-01 | Rice | cytosol | 8.8 | 1.25 |
| VIT_04s0008g00980.t01 | Wine grape | cytosol | 0.8 | 1.19 |
| OQU84655 | Sorghum | cytosol | 7.2 | 1.18 |
| KXG29825 | Sorghum | cytosol | 8.0 | 1.13 |
| TraesCS6A01G186800.1 | Wheat | cytosol | 11.2 | 1.1 |
| Zm00001d016351_P002 | Maize | nucleus | 7.2 | 1.01 |
| TraesCS6B01G217700.1 | Wheat | cytosol | 10.4 | 0.97 |
| TraesCS6D01G173700.3 | Wheat | cytosol | 10.4 | 0.97 |
| Zm00001d016350_P001 | Maize | vacuole | 3.2 | 0.79 |
| CDY54037 | Canola | cytosol | 0.8 | 0.37 |
| CDY67069 | Canola | cytosol | 0.0 | 0.0 |
| VIT_04s0008g00990.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDY72259 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY49860 | EnsemblPlantsGene:GSBRNA2T00093939001 | InterPro:DUF3511 | PANTHER:PTHR33193 | PANTHER:PTHR33193:SF11 | PFAM:PF12023 |
| ProteinID:CDY49860 | ProteinID:CDY49860.1 | SEG:seg | UniParc:UPI0004EE6576 | UniProt:A0A078IG22 | MapMan:35.2 |
Description
BnaA02g16090DBnaA02g16090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG22]
Coordinates
chrLK032864:-:91139..91516
Molecular Weight (calculated)
14013.8 Da
IEP (calculated)
10.617
GRAVY (calculated)
-0.871
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKSKSCREE MRSSSIAYKY HCLTNGGTPE AVAAPSPTNP QLPVMLRSYS TSTYSPHKNP TTVRDNPNSK SNNKVKKGLK EAEIQRKKRV AAYNVYGLEG
101: KVKGSIRKNF KWFKETCSNA VNGLW
101: KVKGSIRKNF KWFKETCSNA VNGLW
001: MFRSKSCREE TRSSSITNKY HCFSHGEKSE SEPTNQQPPV MMRSYSTSTY NAYQNPTIVR DDSNNKSKRS NKVKKKGFKG LCEAEIQRKK RVASYNVYGV
101: EGRVKGSMKK SFKWFKETCS NAVYGLW
101: EGRVKGSMKK SFKWFKETCS NAVYGLW
Arabidopsis Description
At1g72720 [Source:UniProtKB/TrEMBL;Acc:Q9CAI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.