Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032127.1-P | Field mustard | cytosol | 99.75 | 99.75 |
| CDY22956 | Canola | cytosol | 99.51 | 99.51 |
| CDY33416 | Canola | cytosol | 99.26 | 99.26 |
| CDY51692 | Canola | cytosol | 99.02 | 99.02 |
| CDY42205 | Canola | cytosol | 99.02 | 99.02 |
| CDY24617 | Canola | cytosol | 99.02 | 99.02 |
| AT3G19760.1 | Thale cress | cytosol | 96.08 | 96.08 |
| Solyc11g033280.1.1 | Tomato | cytosol, nucleus, plastid | 83.58 | 87.21 |
| GSMUA_Achr9P23810_001 | Banana | cytosol | 82.11 | 86.34 |
| KRH12197 | Soybean | nucleus | 85.29 | 85.71 |
| KRH37217 | Soybean | endoplasmic reticulum | 85.29 | 85.5 |
| VIT_06s0080g00550.t01 | Wine grape | cytosol | 86.76 | 85.3 |
| TraesCS2A01G552800.1 | Wheat | cytosol | 76.72 | 84.82 |
| Os03t0566800-01 | Rice | cytosol, nucleus, plasma membrane | 83.82 | 84.65 |
| EES07819 | Sorghum | cytosol | 84.31 | 84.52 |
| Os01t0639100-01 | Rice | nucleus | 83.58 | 84.41 |
| PGSC0003DMT400019783 | Potato | cytosol | 84.31 | 84.11 |
| Zm00001d051840_P003 | Maize | extracellular, mitochondrion | 83.82 | 84.03 |
| TraesCS2B01G584200.1 | Wheat | mitochondrion | 81.37 | 81.57 |
| TraesCS2D01G554300.1 | Wheat | nucleus | 77.45 | 81.44 |
| HORVU6Hr1G094560.1 | Barley | cytosol | 81.62 | 80.83 |
| TraesCS6D01G401900.1 | Wheat | nucleus | 81.37 | 80.39 |
| TraesCS6A01G416700.1 | Wheat | nucleus | 81.37 | 80.39 |
| TraesCS2D01G553400.1 | Wheat | cytosol | 79.66 | 80.25 |
| TraesCS6B01G472700.1 | Wheat | nucleus | 80.88 | 80.1 |
| GSMUA_Achr3P27120_001 | Banana | cytosol | 63.97 | 78.38 |
| Zm00001d018542_P006 | Maize | cytosol | 83.82 | 77.2 |
| CDY58940 | Canola | cytosol | 75.25 | 75.99 |
| CDY03623 | Canola | cytosol | 75.0 | 75.74 |
| CDY37498 | Canola | cytosol, mitochondrion | 15.93 | 70.65 |
| HORVU3Hr1G015460.1 | Barley | cytosol | 25.74 | 68.63 |
| HORVU3Hr1G015500.1 | Barley | cytosol | 25.74 | 68.63 |
| CDY26130 | Canola | cytosol | 16.91 | 68.32 |
| CDY22577 | Canola | cytosol | 24.51 | 67.11 |
| HORVU3Hr1G050890.1 | Barley | cytosol | 25.98 | 65.43 |
| CDY08220 | Canola | cytosol | 61.03 | 60.44 |
| CDY39079 | Canola | cytosol | 61.03 | 60.44 |
| CDY10607 | Canola | cytosol | 60.54 | 60.1 |
| CDY02469 | Canola | cytosol | 60.54 | 59.95 |
| CDY24057 | Canola | cytosol | 59.31 | 58.74 |
| CDY32586 | Canola | cytosol | 54.41 | 58.73 |
| CDY33073 | Canola | cytosol | 58.82 | 58.25 |
| CDY49861 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 60.05 | 57.38 |
| CDY55205 | Canola | cytosol | 59.31 | 57.21 |
| CDX97528 | Canola | cytosol | 58.82 | 56.47 |
| CDX82505 | Canola | cytosol | 58.82 | 56.07 |
| CDX75739 | Canola | cytosol | 58.82 | 55.05 |
| CDY67069 | Canola | cytosol | 13.48 | 54.46 |
| CDY72259 | Canola | cytosol | 26.23 | 48.2 |
| CDY11154 | Canola | cytosol | 22.55 | 45.54 |
| CDY54037 | Canola | cytosol | 29.17 | 44.57 |
| CDY53867 | Canola | cytosol | 42.65 | 41.23 |
| CDY54061 | Canola | cytosol | 30.15 | 37.73 |
| CDY45702 | Canola | cytosol | 18.38 | 36.41 |
| CDX72939 | Canola | mitochondrion, nucleus | 41.42 | 36.27 |
| CDY51112 | Canola | cytosol | 33.33 | 30.91 |
| CDX85725 | Canola | cytosol | 33.33 | 30.77 |
| CDX70383 | Canola | cytosol | 33.33 | 30.43 |
| CDY71952 | Canola | cytosol | 30.88 | 30.22 |
| CDY48935 | Canola | cytosol, plastid | 34.56 | 29.68 |
| CDX71756 | Canola | cytosol | 34.8 | 29.65 |
| CDY07205 | Canola | cytosol | 35.54 | 29.53 |
| CDX67556 | Canola | cytosol | 34.07 | 29.45 |
| CDX91901 | Canola | cytosol | 36.03 | 29.34 |
| CDY51147 | Canola | cytosol | 35.54 | 29.23 |
| CDY58787 | Canola | cytosol | 34.31 | 29.05 |
| CDX74342 | Canola | cytosol | 35.78 | 28.4 |
| CDY13319 | Canola | cytosol | 33.82 | 28.16 |
| CDX85726 | Canola | cytosol | 33.33 | 27.76 |
| CDX69778 | Canola | cytosol | 33.58 | 27.68 |
| CDX95397 | Canola | cytosol | 33.33 | 27.53 |
| CDX76225 | Canola | cytosol | 33.33 | 27.42 |
| CDX78412 | Canola | cytosol | 33.33 | 27.36 |
| CDY51111 | Canola | cytosol | 16.67 | 27.31 |
| CDY27357 | Canola | cytosol, plastid | 33.82 | 27.11 |
| CDY37067 | Canola | cytosol | 33.82 | 27.06 |
| CDX69777 | Canola | cytosol, nucleus, plasma membrane | 33.58 | 26.2 |
| CDY56825 | Canola | cytosol | 13.48 | 24.12 |
| CDY68148 | Canola | nucleus | 41.91 | 23.14 |
| CDY47205 | Canola | plastid | 24.26 | 20.71 |
| CDY02574 | Canola | plastid | 24.26 | 20.71 |
| CDY23782 | Canola | endoplasmic reticulum, extracellular, vacuole | 14.46 | 19.73 |
| CDY49860 | Canola | cytosol | 2.94 | 9.6 |
Protein Annotations
| MapMan:17.3.1.1.1 | Gene3D:3.40.50.300 | GO:A0A078CZK1 | EnsemblPlants:CDX82280 | ProteinID:CDX82280 | ProteinID:CDX82280.1 |
| InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005524 |
| EnsemblPlantsGene:GSBRNA2T00137386001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014014 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 |
| PANTHER:PTHR24031 | PANTHER:PTHR24031:SF57 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 |
| UniParc:UPI0004EEDD4F | SEG:seg | : | : | : | : |
Description
BnaA03g35410D
Coordinates
chrLK031828:-:391431..394325
Molecular Weight (calculated)
46005.5 Da
IEP (calculated)
6.030
GRAVY (calculated)
-0.301
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEANPSRGG GRRGGGPMDN DKLVFETTEG IEPITNFNDM GIKEDVLRGV YEYGFEKPSA IQQRAVMPIL QGRDVIAQAQ SGTGKTSMIA LSVCQIVDTS
101: SREVQALILS PTRELASQTE KTIQAIGLHA NIQAHACIGG KSVGEDIRKL ENGVHVVSGT PGRVCDMIKR KSLRTRAIKL LILDESDEML SRGFKDQIYD
201: VYRYLPPDLQ VCLVSATLPH EILEMTSKFM TEPVKILVKR DELTLEGIKQ FFVAVEKEEW KFDTLCDLYD TLTITQAVIF CNTKRKVDWL SEKMRTNNFT
301: VSSMHGDMPQ KERDEIMNQF RSGDSRVLIT TDVWARGIDV QQVSLVINYD LPNNRELYIH RIGRSGRFGR KGVAINFVKS DDIKILRDIE QYYSTQIDEM
401: PMNVADLI
101: SREVQALILS PTRELASQTE KTIQAIGLHA NIQAHACIGG KSVGEDIRKL ENGVHVVSGT PGRVCDMIKR KSLRTRAIKL LILDESDEML SRGFKDQIYD
201: VYRYLPPDLQ VCLVSATLPH EILEMTSKFM TEPVKILVKR DELTLEGIKQ FFVAVEKEEW KFDTLCDLYD TLTITQAVIF CNTKRKVDWL SEKMRTNNFT
301: VSSMHGDMPQ KERDEIMNQF RSGDSRVLIT TDVWARGIDV QQVSLVINYD LPNNRELYIH RIGRSGRFGR KGVAINFVKS DDIKILRDIE QYYSTQIDEM
401: PMNVADLI
001: MATANPGRGG GRRGGGAMDD DKLVFETTDG IEPITSFNDM GIKEDVLRGV YEYGFEKPSA IQQRAVMPIL QGRDVIAQAQ SGTGKTSMIA LSVCQVVDTS
101: SREVQALILS PTRELATQTE KTIQAIGLHA NIQAHACIGG NSVGEDIRKL EHGVHVVSGT PGRVCDMIKR RSLRTRAIKL LILDESDEML SRGFKDQIYD
201: VYRYLPPDLQ VCLVSATLPH EILEMTSKFM TEPVKILVKR DELTLEGIKQ FFVAVEKEEW KFDTLCDLYD TLTITQAVIF CNTKRKVDYL SEKMRSHNFT
301: VSSMHGDMPQ KERDAIMNEF RSGDSRVLIT TDVWARGIDV QQVSLVINYD LPNNRELYIH RIGRSGRFGR KGVAINFVKS DDIKILRDIE QYYSTQIDEM
401: PMNVADLI
101: SREVQALILS PTRELATQTE KTIQAIGLHA NIQAHACIGG NSVGEDIRKL EHGVHVVSGT PGRVCDMIKR RSLRTRAIKL LILDESDEML SRGFKDQIYD
201: VYRYLPPDLQ VCLVSATLPH EILEMTSKFM TEPVKILVKR DELTLEGIKQ FFVAVEKEEW KFDTLCDLYD TLTITQAVIF CNTKRKVDYL SEKMRSHNFT
301: VSSMHGDMPQ KERDAIMNEF RSGDSRVLIT TDVWARGIDV QQVSLVINYD LPNNRELYIH RIGRSGRFGR KGVAINFVKS DDIKILRDIE QYYSTQIDEM
401: PMNVADLI
Arabidopsis Description
EIF4A3Eukaryotic initiation factor 4A-III homolog [Source:UniProtKB/Swiss-Prot;Acc:Q94A52]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.