Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007984.1-P | Field mustard | plastid | 91.45 | 94.23 |
| CDY37935 | Canola | nucleus | 89.58 | 88.48 |
| CDX72826 | Canola | plastid | 80.4 | 75.58 |
| CDX96344 | Canola | plastid | 80.4 | 75.58 |
| CDY36684 | Canola | plastid | 76.83 | 74.29 |
| CDX68303 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 73.41 | 72.84 |
| AT1G71770.1 | Thale cress | cytosol, plastid | 74.49 | 70.23 |
| CDY41472 | Canola | cytosol, plastid | 63.3 | 63.49 |
| CDY67365 | Canola | plastid | 24.26 | 53.42 |
| PGSC0003DMT400064531 | Potato | cytosol | 41.68 | 50.38 |
| VIT_18s0001g02490.t01 | Wine grape | plastid | 50.54 | 49.32 |
| CDX69025 | Canola | nucleus, plastid | 46.81 | 49.26 |
| CDX75397 | Canola | nucleus, plastid | 47.12 | 49.19 |
| CDX91689 | Canola | nucleus | 23.33 | 49.18 |
| CDY51957 | Canola | cytosol, plastid | 47.12 | 48.95 |
| CDY62723 | Canola | cytosol | 46.81 | 48.78 |
| CDX89664 | Canola | cytosol | 46.03 | 48.21 |
| KRG91724 | Soybean | cytosol | 48.83 | 48.16 |
| CDX71223 | Canola | cytosol | 47.28 | 47.65 |
| CDX79295 | Canola | cytosol, plastid | 7.31 | 47.0 |
| CDY08990 | Canola | cytosol | 7.15 | 46.46 |
| CDY36634 | Canola | nucleus | 46.81 | 46.38 |
| CDY51045 | Canola | cytosol | 46.97 | 46.25 |
| GSMUA_Achr5P24940_001 | Banana | plastid | 47.74 | 46.1 |
| CDY54068 | Canola | cytosol | 46.81 | 46.09 |
| KRH08608 | Soybean | endoplasmic reticulum | 47.43 | 45.8 |
| CDY46079 | Canola | nucleus | 44.17 | 45.15 |
| KRH70233 | Soybean | cytosol | 43.55 | 44.52 |
| CDX89562 | Canola | nucleus | 44.63 | 44.5 |
| CDY38939 | Canola | nucleus | 44.48 | 44.41 |
| CDY72408 | Canola | plastid | 6.38 | 44.09 |
| CDY67921 | Canola | nucleus | 44.01 | 43.88 |
| CDY67364 | Canola | nucleus | 18.97 | 41.64 |
| CDY33264 | Canola | mitochondrion, nucleus | 12.13 | 39.0 |
| CDY57754 | Canola | nucleus | 12.75 | 38.5 |
| CDX79296 | Canola | plastid | 10.89 | 38.25 |
| CDY30168 | Canola | cytosol | 27.99 | 33.46 |
| CDY56198 | Canola | cytosol | 25.04 | 32.92 |
| CDX92325 | Canola | nucleus | 15.86 | 31.68 |
| CDY37229 | Canola | cytosol | 9.8 | 29.58 |
| CDY43894 | Canola | nucleus | 13.37 | 23.63 |
| CDY59539 | Canola | nucleus | 13.37 | 23.5 |
| CDY06734 | Canola | mitochondrion | 11.04 | 23.28 |
| CDY67617 | Canola | nucleus | 13.69 | 23.1 |
| CDY66740 | Canola | nucleus | 13.69 | 23.1 |
| CDY13992 | Canola | nucleus | 14.46 | 22.2 |
| CDY17286 | Canola | nucleus | 13.84 | 21.98 |
| CDX92537 | Canola | nucleus | 14.15 | 21.72 |
| CDX89287 | Canola | nucleus | 13.84 | 21.5 |
| CDX70874 | Canola | cytosol, nucleus, peroxisome | 14.31 | 21.4 |
| CDY29263 | Canola | nucleus | 13.84 | 21.24 |
| CDX88893 | Canola | cytosol, nucleus, peroxisome | 14.15 | 21.16 |
| CDY34835 | Canola | nucleus | 12.91 | 21.12 |
| CDY19874 | Canola | nucleus | 13.69 | 21.0 |
| CDY46671 | Canola | nucleus | 14.0 | 20.98 |
| CDY18570 | Canola | nucleus | 14.15 | 20.97 |
| CDX92786 | Canola | mitochondrion, nucleus, peroxisome | 13.84 | 20.89 |
| CDY14290 | Canola | nucleus | 13.53 | 20.86 |
| CDX99265 | Canola | nucleus | 13.69 | 20.75 |
| CDX95462 | Canola | nucleus | 13.84 | 20.51 |
| CDY66423 | Canola | nucleus | 13.53 | 20.42 |
| CDY16528 | Canola | nucleus | 13.37 | 20.28 |
| CDX92304 | Canola | nucleus | 13.37 | 20.28 |
| CDY32840 | Canola | nucleus | 13.22 | 20.19 |
| CDX82310 | Canola | nucleus | 12.75 | 19.9 |
| CDY29341 | Canola | nucleus | 12.91 | 19.81 |
| CDY50959 | Canola | nucleus | 13.22 | 19.77 |
| CDY22988 | Canola | nucleus | 12.91 | 19.76 |
| CDY28101 | Canola | nucleus | 13.06 | 19.58 |
| CDY68866 | Canola | nucleus | 12.6 | 19.52 |
| CDY61476 | Canola | nucleus | 12.6 | 19.33 |
| CDY02486 | Canola | nucleus | 12.6 | 19.29 |
| CDX95176 | Canola | nucleus | 12.44 | 19.09 |
| CDY52067 | Canola | nucleus | 12.29 | 18.85 |
| CDY33092 | Canola | nucleus | 12.44 | 18.82 |
| CDY51403 | Canola | nucleus | 12.29 | 18.81 |
| CDY63384 | Canola | mitochondrion, nucleus | 11.98 | 18.42 |
| CDY34639 | Canola | nucleus, plastid, vacuole | 13.06 | 16.57 |
| CDX81822 | Canola | mitochondrion, nucleus | 12.6 | 14.86 |
Protein Annotations
| Gene3D:1.10.1900.10 | MapMan:17.4.2.5 | Gene3D:3.30.70.330 | GO:A0A078EP04 | EnsemblPlants:CDY03685 | ProteinID:CDY03685 |
| ProteinID:CDY03685.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00116479001 | InterPro:IPR000504 | InterPro:IPR002004 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:PABP-dom |
| InterPro:PABP_1234 | InterPro:PABP_HYD | PFAM:PF00076 | PFAM:PF00658 | PFscan:PS50102 | PFscan:PS51309 |
| PANTHER:PTHR24012 | PANTHER:PTHR24012:SF620 | InterPro:RBD_domain_sf | InterPro:RRM_dom | InterPro:RRM_dom_euk | SMART:SM00360 |
| SMART:SM00361 | SMART:SM00517 | SUPFAM:SSF54928 | SUPFAM:SSF63570 | TIGRFAMs:TIGR01628 | UniParc:UPI0004EEB859 |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g15520D
Coordinates
chrLK031945:+:486939..489612
Molecular Weight (calculated)
70887.2 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.495
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASGTAPT TAMVDQASNQ PAVPAVTQVA AAAAPAVEAL QAHPNSSLYV GDLDKSVNEA HLLNLFNQVA PVQTVRVCRD LSHRSLGYAY VNFANPNDAM
101: RAMDTLNYTP IKDRPIRIMR SNRDPSTRLS GKGNVFIKNL DLAGKLIKKK KKKNLDVSID NKDLYDTFST FGTILSCKVE MTLSGRSRGY GFVQFEKEET
201: AQAAIEKLNG MLLNDKKVFV GHFVRHQDRT RSENRAVPRF TNVYVKNLPK EIDDDKLKKT FEKYGDISSA VVMKDESGNS KCFGFVNYQR SEDAAVAVEK
301: MNGTSLGENV LFVGKAQKKS EREEELKRKH EQEKLNRFEK LEGSNLYVKN LDDSVDDEKL KEMFSEYGNV TSSKVMMNSG GMSRGFGFVA YSLPEEASKA
401: MNDMSGKMIG KKPLYVALAQ RKEERRNYLQ TKFSQMRPNG TMTPIPMPGF HQHPSGGAMA GPPHHQMYIG QNGQGLMPSQ PMGYGYQLQL MPRPRSGLAD
501: FVMPYPLHRQ NQHGPWAGFR RMRYMGGVGN RGGMGSLPVD ASPISQNASQ APQKPSPLPI SKLTSALALA SSAKHSQMLG EQLFPLVEKQ EPVHTAKVTG
601: MLLQMDEAEI LHLLEAPEAL KTKVSEALIA LRLSANSPAV SSA
101: RAMDTLNYTP IKDRPIRIMR SNRDPSTRLS GKGNVFIKNL DLAGKLIKKK KKKNLDVSID NKDLYDTFST FGTILSCKVE MTLSGRSRGY GFVQFEKEET
201: AQAAIEKLNG MLLNDKKVFV GHFVRHQDRT RSENRAVPRF TNVYVKNLPK EIDDDKLKKT FEKYGDISSA VVMKDESGNS KCFGFVNYQR SEDAAVAVEK
301: MNGTSLGENV LFVGKAQKKS EREEELKRKH EQEKLNRFEK LEGSNLYVKN LDDSVDDEKL KEMFSEYGNV TSSKVMMNSG GMSRGFGFVA YSLPEEASKA
401: MNDMSGKMIG KKPLYVALAQ RKEERRNYLQ TKFSQMRPNG TMTPIPMPGF HQHPSGGAMA GPPHHQMYIG QNGQGLMPSQ PMGYGYQLQL MPRPRSGLAD
501: FVMPYPLHRQ NQHGPWAGFR RMRYMGGVGN RGGMGSLPVD ASPISQNASQ APQKPSPLPI SKLTSALALA SSAKHSQMLG EQLFPLVEKQ EPVHTAKVTG
601: MLLQMDEAEI LHLLEAPEAL KTKVSEALIA LRLSANSPAV SSA
001: MAAAVATGVA PATMVDQVPS PTAQTSVQVP VSIPLPSPVV VADQTHPNSS LYAGDLDPKV TEAHLFDLFK HVANVVSVRV CRDQNRRSLG YAYINFSNPN
101: DAYRAMEALN YTPLFDRPIR IMLSNRDPST RLSGKGNIFI KNLDASIDNK ALFETFSSFG TILSCKVAMD VTGRSKGYGF VQFEKEESAQ AAIDKLNGML
201: MNDKQVFVGH FIRRQERARD ENTPTPRFTN VYVKNLPKEI GEDELRKTFG KFGVISSAVV MRDQSGNSRC FGFVNFECTE AAASAVEKMN GISLGDDVLY
301: VGRAQKKSER EEELRRKFEQ ERINRFEKSQ GANLYLKNLD DSVDDEKLKE MFSEYGNVTS SKVMLNPQGM SRGFGFVAYS NPEEALRALS EMNGKMIGRK
401: PLYIALAQRK EDRRAHLQAL FSQIRAPGPM SGFHHPPGGP MPGPPQHMYV GQNGASMVPS QPIGYGFQPQ FMPGMRPGSG PGNFIVPYPL QRQPQTGPRM
501: GFRRGATNVQ QHIQQQQLMH RNPSPGMRYM NGASNGRNGM DSSVPQGILP PIIPLPIDAS SISHQKAPLL PISKLTSSLA SASPADRTRM LGEQLYPLVE
601: RHEPLHVAKV TGMLLEMDQA EILHLMESPE ALKSKVSEAL DVLRLSVDPT DHDLGFSTTD
101: DAYRAMEALN YTPLFDRPIR IMLSNRDPST RLSGKGNIFI KNLDASIDNK ALFETFSSFG TILSCKVAMD VTGRSKGYGF VQFEKEESAQ AAIDKLNGML
201: MNDKQVFVGH FIRRQERARD ENTPTPRFTN VYVKNLPKEI GEDELRKTFG KFGVISSAVV MRDQSGNSRC FGFVNFECTE AAASAVEKMN GISLGDDVLY
301: VGRAQKKSER EEELRRKFEQ ERINRFEKSQ GANLYLKNLD DSVDDEKLKE MFSEYGNVTS SKVMLNPQGM SRGFGFVAYS NPEEALRALS EMNGKMIGRK
401: PLYIALAQRK EDRRAHLQAL FSQIRAPGPM SGFHHPPGGP MPGPPQHMYV GQNGASMVPS QPIGYGFQPQ FMPGMRPGSG PGNFIVPYPL QRQPQTGPRM
501: GFRRGATNVQ QHIQQQQLMH RNPSPGMRYM NGASNGRNGM DSSVPQGILP PIIPLPIDAS SISHQKAPLL PISKLTSSLA SASPADRTRM LGEQLYPLVE
601: RHEPLHVAKV TGMLLEMDQA EILHLMESPE ALKSKVSEAL DVLRLSVDPT DHDLGFSTTD
Arabidopsis Description
PAB3Polyadenylate-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64380]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.