Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030985.1-P | Field mustard | mitochondrion, nucleus | 99.76 | 99.76 |
| AT1G17370.1 | Thale cress | mitochondrion, nucleus | 93.78 | 93.56 |
| VIT_09s0002g00880.t01 | Wine grape | mitochondrion, nucleus | 82.06 | 81.67 |
| KRH06218 | Soybean | nucleus | 81.1 | 81.49 |
| KRH47641 | Soybean | nucleus | 81.58 | 80.81 |
| CDY51403 | Canola | nucleus | 77.27 | 76.9 |
| CDY61476 | Canola | nucleus | 77.03 | 76.85 |
| CDY02486 | Canola | nucleus | 77.03 | 76.67 |
| CDY33092 | Canola | nucleus | 77.51 | 76.24 |
| CDX81822 | Canola | mitochondrion, nucleus | 99.28 | 76.15 |
| GSMUA_Achr6P11660_001 | Banana | mitochondrion | 76.56 | 75.65 |
| GSMUA_Achr10P... | Banana | mitochondrion | 75.6 | 74.35 |
| GSMUA_Achr3P02150_001 | Banana | mitochondrion, nucleus | 75.6 | 72.81 |
| Os11t0620100-01 | Rice | nucleus | 73.21 | 69.39 |
| TraesCS4B01G148600.1 | Wheat | nucleus | 73.21 | 68.76 |
| GSMUA_Achr11P... | Banana | nucleus | 72.97 | 68.69 |
| TraesCS4D01G150600.2 | Wheat | nucleus | 72.49 | 67.48 |
| TraesCS4A01G150000.1 | Wheat | mitochondrion | 72.01 | 67.19 |
| Zm00001d048824_P004 | Maize | nucleus | 70.81 | 66.22 |
| Zm00001d026528_P001 | Maize | plastid | 34.69 | 65.91 |
| Os07t0615400-01 | Rice | nucleus | 67.22 | 65.81 |
| EES08860 | Sorghum | nucleus | 69.14 | 65.53 |
| HORVU4Hr1G033990.7 | Barley | golgi, nucleus | 68.18 | 64.92 |
| TraesCS2D01G176700.1 | Wheat | nucleus | 65.55 | 64.32 |
| TraesCS2A01G169100.1 | Wheat | nucleus | 65.31 | 63.78 |
| GSMUA_Achr2P21780_001 | Banana | nucleus, plastid | 75.6 | 63.71 |
| TraesCS2B01G195400.1 | Wheat | nucleus | 65.31 | 63.64 |
| HORVU2Hr1G031260.2 | Barley | nucleus, plastid | 65.31 | 54.93 |
| Zm00001d026522_P001 | Maize | nucleus | 32.06 | 54.92 |
| CDY34835 | Canola | nucleus | 26.32 | 27.99 |
| CDY17286 | Canola | nucleus | 26.32 | 27.16 |
| CDX99265 | Canola | nucleus | 27.51 | 27.12 |
| CDY19874 | Canola | nucleus | 27.03 | 26.97 |
| CDX82310 | Canola | nucleus | 26.55 | 26.94 |
| CDX92304 | Canola | nucleus | 27.27 | 26.89 |
| CDY22988 | Canola | nucleus | 26.55 | 26.43 |
| CDX89287 | Canola | nucleus | 26.08 | 26.33 |
| CDX95462 | Canola | nucleus | 27.27 | 26.27 |
| CDY29263 | Canola | nucleus | 26.32 | 26.25 |
| CDY28101 | Canola | nucleus | 26.79 | 26.11 |
| CDY50959 | Canola | nucleus | 26.79 | 26.05 |
| CDY18570 | Canola | nucleus | 27.03 | 26.04 |
| CDY16528 | Canola | nucleus | 26.32 | 25.94 |
| CDY68866 | Canola | nucleus | 25.6 | 25.78 |
| CDY32840 | Canola | nucleus | 25.84 | 25.65 |
| CDY29341 | Canola | nucleus | 25.6 | 25.54 |
| CDY14290 | Canola | nucleus | 24.88 | 24.94 |
| CDY06734 | Canola | mitochondrion | 18.18 | 24.92 |
| CDY66423 | Canola | nucleus | 24.88 | 24.41 |
| CDX92786 | Canola | mitochondrion, nucleus, peroxisome | 24.64 | 24.18 |
| CDY46671 | Canola | nucleus | 24.64 | 24.01 |
| CDY52067 | Canola | nucleus | 23.68 | 23.63 |
| CDX95176 | Canola | nucleus | 23.68 | 23.63 |
| CDY13992 | Canola | nucleus | 23.21 | 23.15 |
| CDX92537 | Canola | nucleus | 22.73 | 22.67 |
| CDX70874 | Canola | cytosol, nucleus, peroxisome | 22.73 | 22.09 |
| CDX88893 | Canola | cytosol, nucleus, peroxisome | 22.49 | 21.86 |
| CDY34639 | Canola | nucleus, plastid, vacuole | 26.32 | 21.7 |
| CDY67365 | Canola | plastid | 13.64 | 19.52 |
| CDY66740 | Canola | nucleus | 16.51 | 18.11 |
| CDY59539 | Canola | nucleus | 15.79 | 18.03 |
| CDY43894 | Canola | nucleus | 15.55 | 17.86 |
| CDY67617 | Canola | nucleus | 16.27 | 17.85 |
| CDY72408 | Canola | plastid | 3.59 | 16.13 |
| CDX69025 | Canola | nucleus, plastid | 23.21 | 15.88 |
| CDX75397 | Canola | nucleus, plastid | 23.21 | 15.75 |
| CDY62723 | Canola | cytosol | 22.97 | 15.56 |
| CDY51957 | Canola | cytosol, plastid | 22.97 | 15.51 |
| CDY38939 | Canola | nucleus | 23.45 | 15.22 |
| CDX89562 | Canola | nucleus | 23.45 | 15.19 |
| CDY54068 | Canola | cytosol | 23.68 | 15.16 |
| CDY51045 | Canola | cytosol | 23.68 | 15.16 |
| CDY57754 | Canola | nucleus | 7.66 | 15.02 |
| CDY46079 | Canola | nucleus | 22.49 | 14.94 |
| CDY56198 | Canola | cytosol | 17.46 | 14.93 |
| CDX71223 | Canola | cytosol | 22.25 | 14.58 |
| CDX89664 | Canola | cytosol | 21.29 | 14.5 |
| CDY67921 | Canola | nucleus | 22.25 | 14.42 |
| CDY30168 | Canola | cytosol | 18.42 | 14.31 |
| CDY36634 | Canola | nucleus | 21.29 | 13.71 |
| CDX68303 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 19.62 | 12.65 |
| CDY41472 | Canola | cytosol, plastid | 19.38 | 12.64 |
| CDY33264 | Canola | mitochondrion, nucleus | 5.98 | 12.5 |
| CDY36684 | Canola | plastid | 19.86 | 12.48 |
| CDX72826 | Canola | plastid | 20.1 | 12.28 |
| CDX96344 | Canola | plastid | 20.1 | 12.28 |
| CDY37935 | Canola | nucleus | 18.9 | 12.14 |
| CDX79296 | Canola | plastid | 5.26 | 12.02 |
| CDY03685 | Canola | nucleus | 18.42 | 11.98 |
| CDY67364 | Canola | nucleus | 6.7 | 9.56 |
| CDX92325 | Canola | nucleus | 6.7 | 8.7 |
| CDY37229 | Canola | cytosol | 2.87 | 5.63 |
| CDX91689 | Canola | nucleus | 3.59 | 4.92 |
| CDY08990 | Canola | cytosol | 0.96 | 4.04 |
| CDX79295 | Canola | cytosol, plastid | 0.96 | 4.0 |
Protein Annotations
| MapMan:16.9.3 | Gene3D:3.30.70.330 | GO:A0A078J8R6 | UniProt:A0A078J8R6 | EnsemblPlants:CDY63384 | ProteinID:CDY63384 |
| ProteinID:CDY63384.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00039244001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44160 |
| PANTHER:PTHR44160:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EE3891 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng18890DBnaAnng18890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8R6]
Coordinates
chrLK034291:+:19848..23048
Molecular Weight (calculated)
45695.9 Da
IEP (calculated)
7.355
GRAVY (calculated)
-0.450
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRLKQQQQQ QAMMQQALMQ QQSLYHPGLL TAPQIEPIPS GNLPPGFDPT SCRSVYVGNV HIQVTEPLLQ EVFASTGPVE SCKLIRKEQS SYGFVHYFDR
101: RSAGLAILSL NGRHLFGQPI KVNWAYASGQ REDTSAHFNI FVGDLSPEVT DAMLFSCFSV YPSCSDARVM WDQKTGRSRG FGFVSFRNQQ DAQTAIDEAG
201: GKWLGTRQIR CNWATKGATS GEDKISSDSK SVVELTSGVS EDGKDTSNGD APENNAQYTT VYVGNLGPEV SQVDLHRHFY SLGAGVIEEV RIQRDKGFGF
301: VRYSTHVEAA LAIQLGNTHS YLGGRQMKCS WGSKPTPPGT ASNPLPPPGP APIPGFSASD LLAYERQLAM SKMAGMNPMM HHPQGQHALK QAAMGATGSN
401: QAIYDGGFQN AQQLMYYQ
101: RSAGLAILSL NGRHLFGQPI KVNWAYASGQ REDTSAHFNI FVGDLSPEVT DAMLFSCFSV YPSCSDARVM WDQKTGRSRG FGFVSFRNQQ DAQTAIDEAG
201: GKWLGTRQIR CNWATKGATS GEDKISSDSK SVVELTSGVS EDGKDTSNGD APENNAQYTT VYVGNLGPEV SQVDLHRHFY SLGAGVIEEV RIQRDKGFGF
301: VRYSTHVEAA LAIQLGNTHS YLGGRQMKCS WGSKPTPPGT ASNPLPPPGP APIPGFSASD LLAYERQLAM SKMAGMNPMM HHPQGQHALK QAAMGATGSN
401: QAIYDGGFQN AQQLMYYQ
001: MQRLKQQQQQ QQVMMQQALM QQQSLYHPGL LAPPQIEPIP SGNLPPGFDP STCRSVYVGN IHIQVTEPLL QEVFAGTGPV ESCKLIRKEK SSYGFVHYFD
101: RRSAGLAILS LNGRHLFGQP IKVNWAYASG QREDTSSHFN IFVGDLSPEV TDAMLFTCFS VYPTCSDARV MWDQKTGRSR GFGFVSFRNQ QDAQTAIDEI
201: TGKWLGSRQI RCNWATKGAT SGEDKQSSDS KSVVELTSGV SEDGKDTTNG EAPENNAQYT TVYVGNLAPE VSQVDLHRHF HSLGAGVIEE VRVQRDKGFG
301: FVRYSTHVEA ALAIQMGNTH SYLSGRQMKC SWGSKPTPAG TASNPLPPPA PAPIPGFSAS DLLAYERQLA MSKMAGMNPM MHHPQGQHAF KQAAMGATGS
401: NQAIYDGGYQ NAQQLMYYQ
101: RRSAGLAILS LNGRHLFGQP IKVNWAYASG QREDTSSHFN IFVGDLSPEV TDAMLFTCFS VYPTCSDARV MWDQKTGRSR GFGFVSFRNQ QDAQTAIDEI
201: TGKWLGSRQI RCNWATKGAT SGEDKQSSDS KSVVELTSGV SEDGKDTTNG EAPENNAQYT TVYVGNLAPE VSQVDLHRHF HSLGAGVIEE VRVQRDKGFG
301: FVRYSTHVEA ALAIQMGNTH SYLSGRQMKC SWGSKPTPAG TASNPLPPPA PAPIPGFSAS DLLAYERQLA MSKMAGMNPM MHHPQGQHAF KQAAMGATGS
401: NQAIYDGGYQ NAQQLMYYQ
Arabidopsis Description
UBP1BOligouridylate-binding protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQI9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.