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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048824_P004 Maize nucleus 93.64 46.09
EES08860 Sorghum nucleus 88.64 44.22
Os11t0620100-01 Rice nucleus 84.09 41.95
TraesCS4B01G148600.1 Wheat nucleus 81.82 40.45
TraesCS4D01G150600.2 Wheat nucleus 82.27 40.31
TraesCS4A01G150000.1 Wheat mitochondrion 81.36 39.96
GSMUA_Achr6P11660_001 Banana mitochondrion 73.18 38.06
GSMUA_Achr10P... Banana mitochondrion 72.73 37.65
KRH06218 Soybean nucleus 70.91 37.5
VIT_09s0002g00880.t01 Wine grape mitochondrion, nucleus 70.91 37.14
PGSC0003DMT400012431 Potato mitochondrion, nucleus 69.55 36.69
GSMUA_Achr3P02150_001 Banana mitochondrion, nucleus 71.82 36.41
KRH47641 Soybean nucleus 69.55 36.26
Solyc06g063000.2.1 Tomato nucleus 68.64 36.21
PGSC0003DMT400066072 Potato nucleus 67.27 36.1
Solyc07g042180.2.1 Tomato nucleus 65.0 35.93
VIT_11s0016g00700.t01 Wine grape mitochondrion, nucleus 68.64 35.78
HORVU4Hr1G033990.7 Barley golgi, nucleus 71.36 35.76
AT1G17370.1 Thale cress mitochondrion, nucleus 67.73 35.56
GSMUA_Achr11P... Banana nucleus 71.36 35.36
PGSC0003DMT400007513 Potato mitochondrion, nucleus 64.09 35.16
Solyc12g009230.1.1 Tomato mitochondrion, nucleus 64.09 35.16
KRH19347 Soybean mitochondrion, nucleus 65.0 34.88
CDY63384 Canola mitochondrion, nucleus 65.91 34.69
Bra030985.1-P Field mustard mitochondrion, nucleus 65.91 34.69
AT3G14100.1 Thale cress nucleus 65.91 33.96
CDY61476 Canola nucleus 64.55 33.89
Bra030908.1-P Field mustard nucleus 64.55 33.89
CDY02486 Canola nucleus 64.55 33.81
PGSC0003DMT400058919 Potato nucleus 63.18 33.33
Solyc03g122180.2.1 Tomato nucleus 63.18 33.33
CDY51403 Canola nucleus 63.18 33.1
Bra037962.1-P Field mustard nucleus 63.18 33.02
CDY33092 Canola nucleus 63.64 32.94
KRH02581 Soybean mitochondrion 61.82 32.93
GSMUA_Achr2P21780_001 Banana nucleus, plastid 72.73 32.26
AT1G54080.2 Thale cress nucleus 60.45 30.93
Zm00001d009512_P001 Maize mitochondrion 18.18 30.3
Zm00001d018546_P001 Maize endoplasmic reticulum, extracellular 18.64 28.87
Zm00001d031525_P004 Maize nucleus 60.45 28.54
Zm00001d010739_P001 Maize mitochondrion 15.91 28.23
CDX81822 Canola mitochondrion, nucleus 65.91 26.61
Zm00001d049759_P003 Maize nucleus 53.18 25.55
Zm00001d021149_P001 Maize cytosol 14.09 18.79
Zm00001d014094_P002 Maize extracellular, plasma membrane 23.64 14.57
Zm00001d032807_P001 Maize nucleus 23.64 14.48
Zm00001d007929_P002 Maize nucleus 22.73 13.93
Zm00001d017181_P001 Maize mitochondrion, nucleus, plastid 16.82 13.81
Zm00001d020748_P002 Maize plasma membrane 26.82 13.63
Zm00001d016252_P001 Maize nucleus 23.18 13.56
Zm00001d013812_P001 Maize nucleus 25.0 13.55
Zm00001d050838_P001 Maize plastid 26.36 13.49
Zm00001d005912_P001 Maize cytosol, nucleus, peroxisome, plastid 24.55 12.74
Zm00001d049416_P001 Maize extracellular, nucleus 25.91 12.5
VIT_04s0043g01000.t01 Wine grape cytosol, extracellular, mitochondrion 8.18 12.33
Zm00001d026346_P002 Maize extracellular 23.64 12.15
Zm00001d025551_P002 Maize plastid 24.55 11.95
Zm00001d021633_P006 Maize nucleus 24.09 11.4
Zm00001d016897_P002 Maize endoplasmic reticulum, nucleus, peroxisome, plastid 24.55 11.39
Zm00001d002244_P003 Maize nucleus 22.73 11.16
Zm00001d006496_P004 Maize nucleus 25.0 10.13
Zm00001d026522_P001 Maize nucleus 9.55 8.61
Zm00001d025801_P005 Maize cytosol, plastid 22.27 7.52
Zm00001d047790_P001 Maize plastid 23.64 7.07
Zm00001d003106_P003 Maize extracellular, mitochondrion, plasma membrane 20.91 7.06
Zm00001d005276_P007 Maize cytosol 20.91 7.03
Zm00001d019824_P004 Maize cytosol 20.91 7.01
Zm00001d046487_P001 Maize cytosol 20.0 6.84
Zm00001d027869_P002 Maize nucleus 23.64 6.82
Protein Annotations
MapMan:16.9.3Gene3D:3.30.70.330UniProt:A0A1D6JH19ProteinID:AQK46949.1GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0005488InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfPFAM:PF00076
PFscan:PS50102PANTHER:PTHR44160PANTHER:PTHR44160:SF2InterPro:RBD_domain_sfInterPro:RRM_domSMART:SM00360
SUPFAM:SSF54928UniParc:UPI0008423CC3EnsemblPlantsGene:Zm00001d026528EnsemblPlants:Zm00001d026528_P001EnsemblPlants:Zm00001d026528_T001SEG:seg
Description
Oligouridylate-binding protein 1C
Coordinates
chr10:-:147615753..147620708
Molecular Weight (calculated)
24072.5 Da
IEP (calculated)
7.095
GRAVY (calculated)
-0.059
Length
220 amino acids
Sequence
(BLAST)
001: MKQAAAAAAA AQQALLLQQQ SQPPLFPVHH PHPGLLAAPQ IEPIVSGNLP PGFDSSTCRS VYVCNIHLQV TDAVLQEVFQ SIGPVEGCKL IRKEKSSFGF
101: IDYHDRRYAA LAILSLNGRQ LYGQPIKVNW AYTSTPREGT SGHFNIFVGD LCPEVTDATL FAFFSGYSTC SDASVMWDQK TGRSRGFGFV SFRNQQDAQS
201: AINDLNGVFS SSMFLTYVPF
Best Arabidopsis Sequence Match ( AT1G17370.1 )
(BLAST)
001: MQRLKQQQQQ QQVMMQQALM QQQSLYHPGL LAPPQIEPIP SGNLPPGFDP STCRSVYVGN IHIQVTEPLL QEVFAGTGPV ESCKLIRKEK SSYGFVHYFD
101: RRSAGLAILS LNGRHLFGQP IKVNWAYASG QREDTSSHFN IFVGDLSPEV TDAMLFTCFS VYPTCSDARV MWDQKTGRSR GFGFVSFRNQ QDAQTAIDEI
201: TGKWLGSRQI RCNWATKGAT SGEDKQSSDS KSVVELTSGV SEDGKDTTNG EAPENNAQYT TVYVGNLAPE VSQVDLHRHF HSLGAGVIEE VRVQRDKGFG
301: FVRYSTHVEA ALAIQMGNTH SYLSGRQMKC SWGSKPTPAG TASNPLPPPA PAPIPGFSAS DLLAYERQLA MSKMAGMNPM MHHPQGQHAF KQAAMGATGS
401: NQAIYDGGYQ NAQQLMYYQ
Arabidopsis Description
UBP1BOligouridylate-binding protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQI9]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.