Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37900.1 | Thale cress | nucleus | 61.23 | 70.12 |
| AT5G37890.1 | Thale cress | nucleus | 62.32 | 60.14 |
| AT5G37870.1 | Thale cress | nucleus | 59.42 | 58.36 |
| HORVU3Hr1G005260.1 | Barley | cytosol | 13.77 | 41.76 |
| AT1G66620.1 | Thale cress | nucleus | 47.1 | 41.53 |
| AT1G66630.1 | Thale cress | cytosol | 41.67 | 37.95 |
| AT5G62800.1 | Thale cress | nucleus | 46.38 | 36.78 |
| AT1G66610.1 | Thale cress | nucleus | 44.2 | 33.33 |
| AT5G37930.1 | Thale cress | nucleus | 39.13 | 30.95 |
| Solyc03g036460.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 24.64 | 30.77 |
| AT1G66650.1 | Thale cress | nucleus | 35.87 | 30.09 |
| KRH42263 | Soybean | nucleus | 33.7 | 29.06 |
| KRH58384 | Soybean | nucleus | 33.33 | 28.75 |
| PGSC0003DMT400043047 | Potato | cytosol | 17.75 | 26.63 |
| HORVU3Hr1G004860.1 | Barley | cytosol | 24.28 | 26.59 |
| AT1G66660.2 | Thale cress | nucleus | 33.33 | 26.44 |
| TraesCS3B01G053500.1 | Wheat | cytosol | 26.45 | 25.89 |
| TraesCS3D01G504900.1 | Wheat | nucleus | 25.36 | 25.55 |
| VIT_14s0006g01870.t01 | Wine grape | cytosol | 18.12 | 25.0 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 23.91 | 24.81 |
| TraesCS3D01G028800.1 | Wheat | nucleus | 19.2 | 24.77 |
| TraesCS3A01G031100.1 | Wheat | cytosol | 23.91 | 24.54 |
| TraesCS3D01G031300.1 | Wheat | nucleus | 24.28 | 24.45 |
| Solyc03g034460.2.1 | Tomato | nucleus | 31.88 | 24.44 |
| Solyc03g042550.1.1 | Tomato | nucleus | 31.88 | 24.44 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 23.19 | 24.06 |
| HORVU4Hr1G056260.1 | Barley | nucleus | 23.91 | 24.0 |
| TraesCS3A01G048300.1 | Wheat | nucleus | 23.55 | 23.72 |
| TraesCS3B01G033800.1 | Wheat | nucleus | 23.55 | 23.72 |
| TraesCS3B01G050100.1 | Wheat | cytosol | 23.55 | 23.72 |
| TraesCS3A01G031200.1 | Wheat | cytosol | 22.83 | 23.51 |
| TraesCS3B01G560800.1 | Wheat | nucleus | 23.55 | 23.38 |
| Solyc03g042520.1.1 | Tomato | nucleus | 25.72 | 22.9 |
| PGSC0003DMT400043050 | Potato | nucleus | 31.52 | 22.83 |
| Zm00001d041049_P001 | Maize | nucleus | 26.81 | 22.63 |
| TraesCS3A01G030800.1 | Wheat | cytosol | 22.46 | 22.55 |
| TraesCS3A01G062700.1 | Wheat | nucleus | 22.46 | 22.55 |
| TraesCS3B01G053400.1 | Wheat | cytosol, nucleus, plastid | 23.91 | 22.53 |
| TraesCS3B01G074800.1 | Wheat | cytosol | 22.46 | 22.38 |
| KXG32014 | Sorghum | nucleus | 17.75 | 22.27 |
| TraesCS3B01G031200.1 | Wheat | nucleus | 23.55 | 22.26 |
| OQU78944 | Sorghum | nucleus | 26.09 | 22.09 |
| TraesCS3D01G030300.1 | Wheat | nucleus | 23.91 | 22.07 |
| TraesCS2A01G446400.1 | Wheat | cytosol, nucleus, plastid | 21.38 | 21.93 |
| TraesCS3B01G033700.1 | Wheat | nucleus | 23.19 | 21.92 |
| KXG32009 | Sorghum | nucleus | 23.19 | 21.62 |
| HORVU3Hr1G005320.1 | Barley | nucleus | 20.65 | 21.51 |
| KXG37941 | Sorghum | cytosol | 21.74 | 21.43 |
| Solyc03g034450.2.1 | Tomato | nucleus | 30.43 | 21.43 |
| TraesCS3B01G053000.1 | Wheat | cytosol | 21.74 | 21.35 |
| TraesCS4B01G363200.1 | Wheat | nucleus | 25.36 | 21.34 |
| TraesCS3B01G050700.1 | Wheat | nucleus | 23.55 | 21.17 |
| TraesCS5A01G531400.2 | Wheat | nucleus | 25.36 | 21.15 |
| TraesCS4D01G356400.2 | Wheat | nucleus | 25.72 | 21.13 |
| TraesCS3D01G029000.1 | Wheat | cytosol | 21.38 | 20.92 |
| TraesCS3B01G032100.1 | Wheat | cytosol | 21.38 | 20.77 |
| HORVU2Hr1G118560.2 | Barley | nucleus | 21.01 | 20.71 |
| AT2G41980.1 | Thale cress | nucleus | 22.83 | 20.66 |
| TraesCS3B01G050200.1 | Wheat | nucleus | 18.48 | 20.65 |
| TraesCS5A01G228300.1 | Wheat | cytosol | 23.55 | 20.63 |
| TraesCS3A01G030600.1 | Wheat | nucleus | 21.01 | 20.57 |
| TraesCS3B01G052800.1 | Wheat | cytosol | 21.01 | 20.57 |
| TraesCS3B01G050900.1 | Wheat | cytosol | 21.74 | 20.55 |
| TraesCS3A01G062800.1 | Wheat | nucleus | 21.38 | 20.34 |
| AT3G58040.3 | Thale cress | cytosol | 22.46 | 20.13 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 23.55 | 19.88 |
| HORVU3Hr1G004950.1 | Barley | nucleus | 21.38 | 19.67 |
| AT3G61790.1 | Thale cress | nucleus | 23.19 | 19.63 |
| OQU77422 | Sorghum | cytosol | 20.29 | 19.58 |
| HORVU4Hr1G087120.3 | Barley | nucleus | 25.36 | 19.55 |
| TraesCS1A01G060800.1 | Wheat | nucleus | 21.74 | 19.54 |
| HORVU3Hr1G004890.1 | Barley | nucleus | 21.01 | 19.33 |
| AT4G27880.1 | Thale cress | nucleus | 22.83 | 19.27 |
| EES00387 | Sorghum | nucleus | 22.1 | 19.12 |
| TraesCS3A01G031300.1 | Wheat | cytosol | 19.2 | 18.86 |
| TraesCS3A01G030100.1 | Wheat | nucleus | 20.29 | 18.86 |
| TraesCS3B01G054400.1 | Wheat | cytosol | 20.29 | 18.86 |
| TraesCS3D01G015600.1 | Wheat | cytosol | 20.29 | 18.86 |
| TraesCS3B01G028900.1 | Wheat | cytosol | 20.29 | 18.6 |
| TraesCS3B01G052700.1 | Wheat | nucleus | 17.03 | 18.58 |
| EES17731 | Sorghum | nucleus | 23.19 | 18.5 |
| AT5G53360.1 | Thale cress | plasma membrane | 15.58 | 18.45 |
| TraesCSU01G045900.1 | Wheat | cytosol | 19.93 | 18.39 |
| HORVU0Hr1G006120.2 | Barley | cytosol, nucleus, plastid | 18.48 | 18.21 |
| TraesCS2B01G594500.1 | Wheat | nucleus, plastid | 24.64 | 18.13 |
| TraesCS2A01G589200.1 | Wheat | nucleus, plastid | 24.28 | 17.96 |
| TraesCS2D01G564800.1 | Wheat | nucleus, plastid | 24.28 | 17.87 |
| HORVU2Hr1G118840.1 | Barley | plastid | 23.91 | 17.79 |
| TraesCS1D01G061700.1 | Wheat | nucleus | 21.74 | 17.05 |
| TraesCS3B01G032300.1 | Wheat | cytosol | 12.32 | 17.0 |
| HORVU1Hr1G012490.3 | Barley | nucleus | 20.29 | 16.87 |
| HORVU3Hr1G004880.2 | Barley | nucleus | 20.65 | 16.81 |
| TraesCS3A01G032200.1 | Wheat | nucleus | 20.29 | 16.47 |
| TraesCS3B01G052400.1 | Wheat | nucleus | 20.29 | 16.47 |
| TraesCSU01G021700.1 | Wheat | nucleus | 21.74 | 16.44 |
| TraesCS3D01G029600.1 | Wheat | nucleus | 19.93 | 16.42 |
| KXG21322 | Sorghum | nucleus | 22.1 | 16.31 |
| TraesCS3D01G029300.1 | Wheat | nucleus | 19.93 | 16.18 |
| TraesCS2A01G586400.1 | Wheat | nucleus | 21.38 | 16.16 |
| TraesCS2D01G600200.1 | Wheat | nucleus | 21.38 | 16.16 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 20.65 | 16.1 |
| OQU77425 | Sorghum | nucleus | 21.74 | 15.96 |
| OQU86453 | Sorghum | cytosol | 11.96 | 15.42 |
| TraesCSU01G231400.1 | Wheat | nucleus | 19.2 | 15.32 |
| TraesCS1D01G102900.1 | Wheat | nucleus | 20.29 | 14.66 |
| HORVU3Hr1G005270.1 | Barley | nucleus | 17.39 | 14.08 |
| EES02574 | Sorghum | nucleus | 22.83 | 14.06 |
| TraesCS1A01G070000.1 | Wheat | plastid | 12.32 | 13.99 |
| HORVU0Hr1G006130.1 | Barley | nucleus | 16.67 | 13.94 |
| EES17735 | Sorghum | mitochondrion | 22.1 | 13.59 |
| AT3G13672.2 | Thale cress | nucleus | 11.59 | 13.17 |
| TraesCS3B01G031100.1 | Wheat | nucleus | 18.48 | 12.59 |
| TraesCS3A01G032100.1 | Wheat | nucleus | 20.65 | 12.5 |
| TraesCS3D01G029400.1 | Wheat | nucleus | 20.65 | 12.42 |
| TraesCS3D01G029700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.68 | 12.28 |
| TraesCS3B01G052300.1 | Wheat | nucleus | 19.93 | 11.85 |
| Os05t0152700-00 | Rice | cytosol, extracellular | 1.09 | 3.03 |
Protein Annotations
| MapMan:19.2.2.1.5.3.5 | Gene3D:3.30.40.10 | InterPro:7-in-absentia-prot_TRAF-dom | EntrezGene:833770 | ProteinID:AED94246.1 | ArrayExpress:AT5G37910 |
| EnsemblPlantsGene:AT5G37910 | RefSeq:AT5G37910 | TAIR:AT5G37910 | RefSeq:AT5G37910-TAIR-G | EnsemblPlants:AT5G37910.1 | TAIR:AT5G37910.1 |
| Unigene:At.55201 | ProteinID:BAB09037.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR001841 |
| InterPro:IPR008974 | InterPro:IPR013010 | InterPro:IPR013083 | RefSeq:NP_198607.1 | PFAM:PF03145 | PO:PO:0000191 |
| PFscan:PS50089 | PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF43 | UniProt:Q9FKD5 | InterPro:SINA-like |
| SUPFAM:SSF49599 | SUPFAM:SSF57850 | InterPro:TRAF-like | UniParc:UPI00000A5126 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_SIAH | SEG:seg | : | : | : | : |
Description
Putative E3 ubiquitin-protein ligase SINA-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD5]
Coordinates
chr5:-:15096210..15097318
Molecular Weight (calculated)
30853.3 Da
IEP (calculated)
6.671
GRAVY (calculated)
0.032
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLASISEAL ISQGDGGERV AKRQRSAIVL LDLDILDCPI CCEALTSPIF QCDNGHLACG SCCPKLSNKC PACTLPVGHS RSRAMESVLE SILIPCPNVR
101: FGCTKSFFYG KESAHEKECI FSQCSCPSSV CDYTGSYKDL YAHYKLTHST NIFWNIKRFR CANFFTTSML ISDKILIKRV HEKKLLLAVQ CFREPCGVYV
201: TVSFIAPSAP EVGEFSYQLS YNVDGHTVTY ESPEVKRVCK VSIETPQENF MLIPHSLLRG DLLEMQVFII ENVDQE
101: FGCTKSFFYG KESAHEKECI FSQCSCPSSV CDYTGSYKDL YAHYKLTHST NIFWNIKRFR CANFFTTSML ISDKILIKRV HEKKLLLAVQ CFREPCGVYV
201: TVSFIAPSAP EVGEFSYQLS YNVDGHTVTY ESPEVKRVCK VSIETPQENF MLIPHSLLRG DLLEMQVFII ENVDQE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.